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LOC4330337 B3 domain-containing protein Os02g0683500-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4330337, updated on 10-Oct-2024

Summary

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Gene symbol
LOC4330337
Gene description
B3 domain-containing protein Os02g0683500-like
Locus tag
OSNPB_020683500
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1123_G04.23
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Genomic context

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See LOC4330337 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (28421486..28423378, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (27930915..27934701, complement)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene mitochondrial import inner membrane translocase subunit Tim13-like Neighboring gene uncharacterized LOC4330333 Neighboring gene heavy metal-associated isoprenylated plant protein 45 Neighboring gene tobamovirus multiplication protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B3 domain-containing protein Os02g0683500
Names
LOC_Os02g45850
RAV-like B3 domain DNA binding protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001416831.1 → NP_001403760.1  B3 domain-containing protein Os02g0683500

    Status: VALIDATED

    Source sequence(s)
    AK109908
    UniProtKB/Swiss-Prot
    A0A0N7KFW0, Q6EU30

  2. NM_001416832.1 → NP_001403761.1  B3 domain-containing protein Os02g0683500

    Status: VALIDATED

    Source sequence(s)
    AP014958
    UniProtKB/Swiss-Prot
    A0A0N7KFW0, Q6EU30

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    28421486..28423378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6EU30.1 GenPept UniProtKB/Swiss-Prot:Q6EU30

Gene LinkOut

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Molecular Biology Databases
Research Materials