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LOC4329700 trihelix transcription factor ENAP1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4329700, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4329700
Gene description
trihelix transcription factor ENAP1
Locus tag
OSNPB_020565000
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC4329700 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (21929949..21931684, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (21449572..21451401, complement)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene bHLH transcription factor RHL1 Neighboring gene transfer RNA alanine (anticodon CGC) Neighboring gene probable nucleoside diphosphate kinase 5 Neighboring gene signal peptidase complex subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trihelix transcription factor ENAP1
Names
Os02g0565000
P0020C11.22
putative 6b-interacting protein 1
trihelix transcription factor ASIL1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    21929949..21931684 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015767594.3 → XP_015623080.1  trihelix transcription factor ENAP1

    UniProtKB/TrEMBL
    A3A841, Q6Z7E6
    Conserved Domains (1) summary
    pfam13837
    Location:61 → 143
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
Nucleotide Protein
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