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hivep3.L HIVEP zinc finger 3 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 432339, updated on 17-Aug-2024

Summary

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Official Symbol
hivep3.L
Official Full Name
HIVEP zinc finger 3 L homeolog
Primary source
Xenbase:XB-GENE-864883
Locus tag
XELAEV_18012064mg
See related
EnsemblRapid:ENSXLAG00005035528
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
hivep3
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Genomic context

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See hivep3.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (59568854..59664852)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (57099084..57195165)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene fatty acid binding protein 3 L homeolog Neighboring gene serine incorporator 2 L homeolog Neighboring gene uncharacterized LOC121399922 Neighboring gene endothelin 2 L homeolog Neighboring gene forkhead box O6 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
  
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
transcription factor HIVEP3
Names
human immunodeficiency virus type I enhancer binding protein 3 L homeolog
schnurri 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    59568854..59664852
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018246410.2 → XP_018101899.1  transcription factor HIVEP3 isoform X1

    UniProtKB/TrEMBL
    A0A8J0UEH3, A0A974DM13
    Related
    ENSXLAP00005106223.1, ENSXLAT00005108301.1

  2. XM_041581919.1 → XP_041437853.1  transcription factor HIVEP3 isoform X2

    UniProtKB/TrEMBL
    A0A8J1M883, A0A974DM13
    Related
    ENSXLAP00005106206.1, ENSXLAT00005108283.1
    Conserved Domains (2) summary
    sd00017
    Location:168 → 188
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1623 → 1643
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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