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PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase [ Gallus gallus (chicken) ]

Gene ID: 428607, updated on 10-Oct-2024

Summary

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Symbol
PCMT1provided by CGNC
Full Name
protein-L-isoaspartate (D-aspartate) O-methyltransferaseprovided by CGNC
Primary source
CGNC:9409
See related
Ensembl:ENSGALG00010005540
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PCMT1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (47902226..47936306)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (47803921..47838082)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene large tumor suppressor kinase 1 Neighboring gene nucleoporin 43 Neighboring gene LDL receptor related protein 11 Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 14C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-L-isoaspartate (D-aspartate) O-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-L-isoaspartate(D-aspartate) O-methyltransferase
Names
L-isoaspartyl protein carboxyl methyltransferase
PIMT
protein L-isoaspartyl/D-aspartyl methyltransferase
protein-beta-aspartate methyltransferase
NP_001026696.1
XP_046770282.1
XP_046794948.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031525.2 → NP_001026696.1  protein-L-isoaspartate(D-aspartate) O-methyltransferase

    See identical proteins and their annotated locations for NP_001026696.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000063
    UniProtKB/Swiss-Prot
    Q5F3N1
    UniProtKB/TrEMBL
    A0A8V0XPK9
    Related
    ENSGALP00010007821.1, ENSGALT00010013259.1
    Conserved Domains (1) summary
    pfam01135
    Location:8 → 216
    PCMT; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    47902226..47936306
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046938992.1 → XP_046794948.1  protein-L-isoaspartate(D-aspartate) O-methyltransferase isoform X1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    47803921..47838082
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046914326.1 → XP_046770282.1  protein-L-isoaspartate(D-aspartate) O-methyltransferase isoform X1

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5F3N1.3 GenPept UniProtKB/Swiss-Prot:Q5F3N1

Gene LinkOut

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Molecular Biology Databases
Research Materials