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SLC3A1 solute carrier family 3 member 1 [ Gallus gallus (chicken) ]

Gene ID: 428569, updated on 17-Aug-2024

Summary

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Symbol
SLC3A1provided by CGNC
Full Name
solute carrier family 3 member 1provided by CGNC
Primary source
CGNC:7580
See related
Ensembl:ENSGALG00010020402
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See SLC3A1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (25166494..25180882)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (25093482..25107903)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene circumsporozoite protein-like Neighboring gene uncharacterized LOC121110335 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1B Neighboring gene uncharacterized LOC121113160 Neighboring gene prolyl endopeptidase-like Neighboring gene calmodulin-lysine N-methyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in amino acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral and basic amino acid transport protein rBAT
Names
solute carrier family 3 (amino acid transporter heavy chain), member 1
solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    25166494..25180882
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004935370.5 → XP_004935427.1  neutral and basic amino acid transport protein rBAT

    UniProtKB/TrEMBL
    A0A8V0ZD68, E1C011
    Related
    ENSGALP00010029163.1, ENSGALT00010049328.1
    Conserved Domains (2) summary
    cd11359
    Location:115 → 562
    AmyAc_SLC3A1; Alpha amylase catalytic domain found in Solute Carrier family 3 member 1 proteins
    pfam16028
    Location:58 → 123
    SLC3A2_N; Solute carrier family 3 member 2 N-terminus

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    25093482..25107903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040667709.2 → XP_040523643.1  neutral and basic amino acid transport protein rBAT

    UniProtKB/TrEMBL
    A0A8V0ZD68, E1C011
    Conserved Domains (2) summary
    cd11359
    Location:115 → 562
    AmyAc_SLC3A1; Alpha amylase catalytic domain found in Solute Carrier family 3 member 1 proteins
    pfam16028
    Location:58 → 123
    SLC3A2_N; Solute carrier family 3 member 2 N-terminus
Nucleotide Protein
Heading Accession and Version

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