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CRYGN crystallin gamma N [ Gallus gallus (chicken) ]

Gene ID: 428406, updated on 17-Aug-2024

Summary

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Official Symbol
CRYGNprovided by CGNC
Official Full Name
crystallin gamma Nprovided by CGNC
Primary source
CGNC:4644
See related
Ensembl:ENSGALG00010027125
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See CRYGN in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (6266771..6273415, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (6264688..6271321, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene negative regulator of ubiquitin like proteins 1 Neighboring gene WD repeat domain 86 Neighboring gene Ras homolog enriched in brain Neighboring gene protein kinase AMP-activated non-catalytic subunit gamma 2 Neighboring gene uncharacterized LOC112531929 Neighboring gene microRNA mir-12239

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of eye lens IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lens development in camera-type eye IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in visual perception IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-crystallin N
Names
gammaN-crystallin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001166674.3 → NP_001160146.2  gamma-crystallin N

    See identical proteins and their annotated locations for NP_001160146.2

    Status: VALIDATED

    Source sequence(s)
    HAEL01009337, JAENSK010000035
    UniProtKB/TrEMBL
    D0FH75
    Conserved Domains (1) summary
    pfam00030
    Location:7 → 88
    Crystall; Beta/Gamma crystallin

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    6266771..6273415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040685987.2 → XP_040541921.1  gamma-crystallin N isoform X1

    UniProtKB/TrEMBL
    A0A8V1AES7
    Conserved Domains (1) summary
    smart00247
    Location:27 → 108
    XTALbg; Beta/gamma crystallins

  2. XM_040686010.2 → XP_040541944.1  gamma-crystallin N isoform X3

    Conserved Domains (2) summary
    smart00247
    Location:7 → 88
    XTALbg; Beta/gamma crystallins
    cl02528
    Location:96 → 134
    Crystall; Beta/Gamma crystallin

  3. XM_046925831.1 → XP_046781787.1  gamma-crystallin N isoform X1

    UniProtKB/TrEMBL
    A0A8V1AES7
    Related
    ENSGALP00010040025.1, ENSGALT00010065759.1

  4. XM_040685995.2 → XP_040541929.1  gamma-crystallin N isoform X2

    Conserved Domains (2) summary
    smart00247
    Location:27 → 108
    XTALbg; Beta/gamma crystallins
    cl02528
    Location:116 → 154
    Crystall; Beta/Gamma crystallin

RNA

  1. XR_005854718.2 RNA Sequence

  2. XR_006935880.1 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6264688..6271321 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046911663.1 → XP_046767619.1  gamma-crystallin N isoform X3

  2. XM_046911662.1 → XP_046767618.1  gamma-crystallin N isoform X4

  3. XM_046911660.1 → XP_046767616.1  gamma-crystallin N isoform X1

  4. XM_046911661.1 → XP_046767617.1  gamma-crystallin N isoform X2

RNA

  1. XR_006933434.1 RNA Sequence

  2. XR_006933435.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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