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CDO1 cysteine dioxygenase type 1 [ Gallus gallus (chicken) ]

Gene ID: 427391, updated on 17-Aug-2024

Summary

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Symbol
CDO1provided by CGNC
Full Name
cysteine dioxygenase type 1provided by CGNC
Primary source
CGNC:1684
See related
Ensembl:ENSGALG00010009376
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See CDO1 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (73475586..73485465)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (73475586..73485465)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene adaptor related protein complex 3 sigma 1 subunit Neighboring gene autophagy related 12 Neighboring gene uncharacterized LOC107052393 Neighboring gene uncharacterized LOC124417558 Neighboring gene transmembrane p24 trafficking protein 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-cysteine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine dioxygenase type 1
Names
cysteine dioxygenase, type I
XP_046761912.1
XP_046793186.1
XP_046793187.1
XP_424964.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    73475586..73485465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_424964.6 → XP_424964.2  cysteine dioxygenase type 1 isoform X1

    UniProtKB/TrEMBL
    E1C9J4
    Related
    ENSGALP00010012854.1, ENSGALT00010022350.1
    Conserved Domains (1) summary
    pfam05995
    Location:1 → 174
    CDO_I; Cysteine dioxygenase type I

  2. XM_046905956.1 → XP_046761912.1  cysteine dioxygenase type 1 isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    73475586..73485465
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046937230.1 → XP_046793186.1  cysteine dioxygenase type 1 isoform X1

    UniProtKB/TrEMBL
    E1C9J4

  2. XM_046937231.1 → XP_046793187.1  cysteine dioxygenase type 1 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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