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FNTA farnesyltransferase, CAAX box, alpha [ Gallus gallus (chicken) ]

Gene ID: 427299, updated on 10-Oct-2024

Summary

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Symbol
FNTAprovided by CGNC
Full Name
farnesyltransferase, CAAX box, alphaprovided by CGNC
Primary source
CGNC:11469
See related
Ensembl:ENSGALG00010013732
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See FNTA in Genome Data Viewer
Location:
chromosome: Z
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (54531049..54545795, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (54531049..54545795, complement)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 170 Neighboring gene hook microtubule tethering protein 3 Neighboring gene potassium channel modulatory factor 1 Neighboring gene fucosyltransferase 10 Neighboring gene neuregulin 1 Neighboring gene uncharacterized LOC112530610

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CAAX-protein geranylgeranyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein farnesyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein farnesylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein geranylgeranylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CAAX-protein geranylgeranyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein farnesyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
XP_015135985.1
XP_046761689.1
XP_046761690.1
XP_046791972.1
XP_046791973.1
XP_046791974.1
XP_046791975.1
XP_424881.4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    54531049..54545795 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046905734.1 → XP_046761690.1  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A8V0YTE3
    Related
    ENSGALP00010019490.1, ENSGALT00010032952.1

  2. XM_046905733.1 → XP_046761689.1  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A8V0YTE3

  3. XM_015280499.4 → XP_015135985.1  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha isoform X2

    UniProtKB/TrEMBL
    A0A8V0YNE3
    Related
    ENSGALP00010019487.1, ENSGALT00010032947.1
    Conserved Domains (2) summary
    PLN02789
    Location:53 → 347
    PLN02789; farnesyltranstransferase
    pfam01239
    Location:174 → 200
    PPTA; Protein prenyltransferase alpha subunit repeat

  4. XM_424881.8 → XP_424881.4  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A8V0YNE3, A0A8V0YTE3
    Conserved Domains (2) summary
    PLN02789
    Location:86 → 380
    PLN02789; farnesyltranstransferase
    pfam01239
    Location:207 → 233
    PPTA; Protein prenyltransferase alpha subunit repeat

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    54531049..54545795 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046936018.1 → XP_046791974.1  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A8V0YTE3

  2. XM_046936017.1 → XP_046791973.1  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A8V0YTE3

  3. XM_046936019.1 → XP_046791975.1  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha isoform X2

  4. XM_046936016.1 → XP_046791972.1  protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha isoform X1

    UniProtKB/TrEMBL
    A0A8V0YTE3
Nucleotide Protein Strain
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