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TBCE tubulin folding cofactor E [ Gallus gallus (chicken) ]

Gene ID: 426319, updated on 10-Oct-2024

Summary

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Symbol
TBCEprovided by CGNC
Full Name
tubulin folding cofactor Eprovided by CGNC
Primary source
CGNC:10430
See related
Ensembl:ENSGALG00010009452
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See TBCE in Genome Data Viewer
Location:
chromosome: 3
Exon count:
19
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (37738708..37759344, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (37642785..37664020, complement)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110430 Neighboring gene G protein subunit gamma 4 Neighboring gene beta-1,3-N-acetylgalactosaminyltransferase 2 Neighboring gene uncharacterized LOC112532059 Neighboring gene geranylgeranyl diphosphate synthase 1 Neighboring gene AT-rich interaction domain 4B Neighboring gene translation initiation factor IF-2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin-specific chaperone E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    37738708..37759344 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040698269.2 → XP_040554203.1  tubulin-specific chaperone E isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y246
    Related
    ENSGALP00010013027.1, ENSGALT00010022594.1
    Conserved Domains (5) summary
    smart01052
    Location:10 → 74
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG4886
    Location:154 → 371
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:233 → 280
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:156 → 181
    LRR_RI; leucine-rich repeat [structural motif]
    cd17044
    Location:446 → 528
    Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins

  2. XM_040698270.2 → XP_040554204.1  tubulin-specific chaperone E isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y246
    Conserved Domains (5) summary
    smart01052
    Location:10 → 74
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG4886
    Location:154 → 371
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:233 → 280
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:156 → 181
    LRR_RI; leucine-rich repeat [structural motif]
    cd17044
    Location:446 → 528
    Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins

  3. XM_423980.8 → XP_423980.5  tubulin-specific chaperone E isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y246
    Conserved Domains (5) summary
    smart01052
    Location:10 → 74
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG4886
    Location:154 → 371
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:233 → 280
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:156 → 181
    LRR_RI; leucine-rich repeat [structural motif]
    cd17044
    Location:446 → 528
    Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins

  4. XM_046939489.1 → XP_046795445.1  tubulin-specific chaperone E isoform X2

  5. XM_040698271.2 → XP_040554205.1  tubulin-specific chaperone E isoform X2

    UniProtKB/TrEMBL
    A0A8V0XXL9
    Related
    ENSGALP00010013018.1, ENSGALT00010022581.1
    Conserved Domains (5) summary
    smart01052
    Location:10 → 51
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG4886
    Location:131 → 348
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:210 → 257
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:133 → 158
    LRR_RI; leucine-rich repeat [structural motif]
    cd17044
    Location:423 → 505
    Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins

  6. XM_040698272.2 → XP_040554206.1  tubulin-specific chaperone E isoform X3

    Conserved Domains (4) summary
    smart01052
    Location:10 → 74
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG4886
    Location:154 → 368
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:233 → 280
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:156 → 181
    LRR_RI; leucine-rich repeat [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    37642785..37664020 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040668510.2 → XP_040524444.1  tubulin-specific chaperone E isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y246
    Conserved Domains (4) summary
    smart01052
    Location:10 → 74
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG4886
    Location:154 → 371
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:156 → 181
    LRR_RI; leucine-rich repeat [structural motif]
    cd17044
    Location:446 → 528
    Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins

  2. XM_040668512.2 → XP_040524446.1  tubulin-specific chaperone E isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y246
    Conserved Domains (4) summary
    smart01052
    Location:10 → 74
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG4886
    Location:154 → 371
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:156 → 181
    LRR_RI; leucine-rich repeat [structural motif]
    cd17044
    Location:446 → 528
    Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins

  3. XM_040668511.2 → XP_040524445.1  tubulin-specific chaperone E isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y246
    Conserved Domains (4) summary
    smart01052
    Location:10 → 74
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG4886
    Location:154 → 371
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:156 → 181
    LRR_RI; leucine-rich repeat [structural motif]
    cd17044
    Location:446 → 528
    Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins

  4. XM_046914887.1 → XP_046770843.1  tubulin-specific chaperone E isoform X2

  5. XM_040668513.2 → XP_040524447.1  tubulin-specific chaperone E isoform X2

    UniProtKB/TrEMBL
    A0A8V0XXL9
    Conserved Domains (4) summary
    smart01052
    Location:10 → 51
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG4886
    Location:131 → 348
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:133 → 158
    LRR_RI; leucine-rich repeat [structural motif]
    cd17044
    Location:423 → 505
    Ubl_TBCE; ubiquitin-like (Ubl) domain found in tubulin-folding cofactor E (TBCE) and similar proteins

  6. XM_040668514.2 → XP_040524448.1  tubulin-specific chaperone E isoform X3

    Conserved Domains (3) summary
    smart01052
    Location:10 → 74
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    COG4886
    Location:154 → 368
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:156 → 181
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
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