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PASK PAS domain containing serine/threonine kinase [ Gallus gallus (chicken) ]

Gene ID: 424845, updated on 17-Aug-2024

Summary

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Symbol
PASKprovided by CGNC
Full Name
PAS domain containing serine/threonine kinaseprovided by CGNC
Primary source
CGNC:4507
See related
Ensembl:ENSGALG00010023299
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PASK in Genome Data Viewer
Location:
chromosome: 9
Exon count:
17
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (4568288..4585973, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (4401038..4418727, complement)

Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene microRNA 1704 Neighboring gene sushi, nidogen and EGF like domains 1 Neighboring gene mitochondrial transcription termination factor 4 Neighboring gene protein phosphatase 1 regulatory subunit 7 Neighboring gene high density lipoprotein binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PAS domain-containing serine/threonine-protein kinase
XP_015132572.2
XP_015132573.2
XP_040534955.1
XP_040534956.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4568288..4585973 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015277087.3 → XP_015132573.2  PAS domain-containing serine/threonine-protein kinase isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZUL0
    Conserved Domains (1) summary
    cl21453
    Location:985 → 1237
    PKc_like; Protein Kinases, catalytic domain

  2. XM_015277086.3 → XP_015132572.2  PAS domain-containing serine/threonine-protein kinase isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZUL0
    Related
    ENSGALP00010034538.1, ENSGALT00010056810.1
    Conserved Domains (1) summary
    cl21453
    Location:1006 → 1258
    PKc_like; Protein Kinases, catalytic domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4401038..4418727 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040679022.2 → XP_040534956.1  PAS domain-containing serine/threonine-protein kinase isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZUL0
    Conserved Domains (1) summary
    cl21453
    Location:985 → 1237
    PKc_like; Protein Kinases, catalytic domain

  2. XM_040679021.2 → XP_040534955.1  PAS domain-containing serine/threonine-protein kinase isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZUL0
    Conserved Domains (1) summary
    cl21453
    Location:1006 → 1258
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein Strain
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