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CPT2 carnitine palmitoyltransferase 2 [ Gallus gallus (chicken) ]

Gene ID: 424649, updated on 10-Oct-2024

Summary

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Official Symbol
CPT2provided by CGNC
Official Full Name
carnitine palmitoyltransferase 2provided by CGNC
Primary source
CGNC:8117
See related
Ensembl:ENSGALG00010025145
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See CPT2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (24266657..24326803)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (24278934..24339024)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054037 Neighboring gene enoyl-CoA hydratase domain containing 2 Neighboring gene sterol carrier protein 2 Neighboring gene podocan Neighboring gene solute carrier family 1 member 7 Neighboring gene microRNA 6623 Neighboring gene uncharacterized LOC124418131 Neighboring gene CXXC motif containing zinc binding protein Neighboring gene microRNA 1675

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-palmitoyltransferase 2, mitochondrial
Names
carnitine palmitoyltransferase II
NP_001026458.3
XP_025008648.2
XP_040560613.1
XP_046778798.1
XP_046778799.1
XP_046778800.1
XP_046800467.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031287.3 → NP_001026458.3  carnitine O-palmitoyltransferase 2, mitochondrial precursor

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000239
    UniProtKB/TrEMBL
    A0A8V1A689, A0A8V1A966
    Related
    ENSGALP00010037929.1, ENSGALT00010061347.1

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    24266657..24326803
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040704679.2 → XP_040560613.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A8V1A966

  2. XM_046944511.1 → XP_046800467.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X1

    Related
    ENSGALP00010037927.1, ENSGALT00010061344.1

  3. XM_025152880.3 → XP_025008648.2  carnitine O-palmitoyltransferase 2, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8V1A966

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    24278934..24339024
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046922844.1 → XP_046778800.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X3

  2. XM_046922842.1 → XP_046778798.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X1

  3. XM_046922843.1 → XP_046778799.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
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