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ZDHHC6 zinc finger DHHC-type containing 6 [ Gallus gallus (chicken) ]

Gene ID: 423897, updated on 17-Aug-2024

Summary

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Symbol
ZDHHC6provided by CGNC
Full Name
zinc finger DHHC-type containing 6provided by CGNC
Primary source
CGNC:6735
See related
Ensembl:ENSGALG00010019807
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ZDHHC6 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (27521186..27531276, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (27411647..27421734, complement)

Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124418092 Neighboring gene uncharacterized LOC121111208 Neighboring gene uncharacterized LOC107053735 Neighboring gene acyl-CoA synthetase long-chain family member 5 Neighboring gene vesicle transport through interaction with t-SNAREs 1A Neighboring gene transcription factor 7-like 2 (T-cell specific, HMG-box)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein palmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
palmitoyltransferase ZDHHC6
XP_015144449.1
XP_015144450.1
XP_040530969.1
XP_040530970.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    27521186..27531276 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015288963.4 → XP_015144449.1  palmitoyltransferase ZDHHC6 isoform X2

    Conserved Domains (2) summary
    pfam01529
    Location:76 → 196
    DHHC; DHHC palmitoyltransferase
    cl17036
    Location:272 → 348
    SH3; Src Homology 3 domain superfamily

  2. XM_015288964.4 → XP_015144450.1  palmitoyltransferase ZDHHC6 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZI56
    Related
    ENSGALP00010028275.1, ENSGALT00010047826.1
    Conserved Domains (2) summary
    pfam01529
    Location:90 → 235
    DHHC; DHHC palmitoyltransferase
    cl17036
    Location:311 → 387
    SH3; Src Homology 3 domain superfamily

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    27411647..27421734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040675035.2 → XP_040530969.1  palmitoyltransferase ZDHHC6 isoform X2

    Conserved Domains (2) summary
    pfam01529
    Location:76 → 196
    DHHC; DHHC palmitoyltransferase
    cl17036
    Location:272 → 348
    SH3; Src Homology 3 domain superfamily

  2. XM_040675036.2 → XP_040530970.1  palmitoyltransferase ZDHHC6 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZI56
    Conserved Domains (2) summary
    pfam01529
    Location:90 → 235
    DHHC; DHHC palmitoyltransferase
    cl17036
    Location:311 → 387
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein Strain
Heading Accession and Version

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