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RHOJ ras homolog family member J [ Gallus gallus (chicken) ]

Gene ID: 423513, updated on 17-Aug-2024

Summary

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Symbol
RHOJprovided by CGNC
Full Name
ras homolog family member Jprovided by CGNC
Primary source
CGNC:8985
See related
Ensembl:ENSGALG00010017732
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See RHOJ in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (52915438..52967080, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (52894997..52946744, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110834 Neighboring gene sphingosine-1-phosphate phosphatase 1 Neighboring gene uncharacterized LOC101747773 Neighboring gene WD repeat domain 89 Neighboring gene protein phosphatase 2 regulatory subunit B'epsilon Neighboring gene uncharacterized LOC107053572 Neighboring gene glycoprotein hormone beta 5 Neighboring gene uncharacterized LOC101748028 Neighboring gene potassium voltage-gated channel subfamily H member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho-related GTP-binding protein RhoJ
Names
ras homolog gene family, member J

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001277548.2 → NP_001264477.1  rho-related GTP-binding protein RhoJ isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000215
    UniProtKB/TrEMBL
    A0A8V0Z372
    Conserved Domains (1) summary
    cl38936
    Location:22 → 195
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. NM_001397247.1 → NP_001384176.1  rho-related GTP-binding protein RhoJ isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000215
    UniProtKB/TrEMBL
    A0A8V0Z372
    Related
    ENSGALP00010025360.1, ENSGALT00010042870.1
    Conserved Domains (1) summary
    cl38936
    Location:22 → 195
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  3. NM_001397248.1 → NP_001384177.1  rho-related GTP-binding protein RhoJ isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000215
    Conserved Domains (1) summary
    cl38936
    Location:22 → 194
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  4. NM_001397249.1 → NP_001384178.1  rho-related GTP-binding protein RhoJ isoform 3

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000215
    Conserved Domains (1) summary
    cl38936
    Location:22 → 140
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    52915438..52967080 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    52894997..52946744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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