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EXOC1 exocyst complex component 1 [ Gallus gallus (chicken) ]

Gene ID: 422747, updated on 17-Aug-2024

Summary

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Official Symbol
EXOC1provided by CGNC
Official Full Name
exocyst complex component 1provided by CGNC
Primary source
CGNC:10317
See related
Ensembl:ENSGALG00010015143
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SEC3L1
Orthologs
human mouse all
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Genomic context

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See EXOC1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
21
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (64475079..64500033, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (64457051..64481748, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene aminoadipate-semialdehyde dehydrogenase Neighboring gene capping protein inhibiting regulator of actin dynamics Neighboring gene centrosomal protein 135 Neighboring gene uncharacterized LOC121110755 Neighboring gene exocyst complex component 1-like Neighboring gene neuromedin U

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4,5-bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi to plasma membrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of exocyst IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exocyst complex component 1
Names
SEC3-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    64475079..64500033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001232119.6 → XP_001232120.1  exocyst complex component 1 isoform X8

    UniProtKB/TrEMBL
    A0A1D5P782
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 857
    Sec3_C; Exocyst complex component Sec3

  2. XM_004936023.5 → XP_004936080.1  exocyst complex component 1 isoform X6

    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 872
    Sec3_C; Exocyst complex component Sec3

  3. XM_040700444.2 → XP_040556378.1  exocyst complex component 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0YRB9
    Related
    ENSGALP00010021240.1, ENSGALT00010036485.1
    Conserved Domains (2) summary
    PRK03918
    Location:154 → 256
    PRK03918; DNA double-strand break repair ATPase Rad50
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1

  4. XM_004936022.5 → XP_004936079.1  exocyst complex component 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YJX7
    Related
    ENSGALP00010021238.1, ENSGALT00010036483.1
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 890
    Sec3_C; Exocyst complex component Sec3

  5. XM_015285545.4 → XP_015141031.1  exocyst complex component 1 isoform X7

    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 864
    Sec3_C; Exocyst complex component Sec3

  6. XM_420700.8 → XP_420700.2  exocyst complex component 1 isoform X4

    UniProtKB/TrEMBL
    E1BS87
    Related
    ENSGALP00010021242.1, ENSGALT00010036487.1
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 879
    Sec3_C; Exocyst complex component Sec3

  7. XM_015285543.4 → XP_015141029.1  exocyst complex component 1 isoform X3

    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 882
    Sec3_C; Exocyst complex component Sec3

  8. XM_015285542.4 → XP_015141028.1  exocyst complex component 1 isoform X1

    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 897
    Sec3_C; Exocyst complex component Sec3

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    64457051..64481748 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040671486.2 → XP_040527420.1  exocyst complex component 1 isoform X8

    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 857
    Sec3_C; Exocyst complex component Sec3

  2. XM_040671483.2 → XP_040527417.1  exocyst complex component 1 isoform X6

    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 872
    Sec3_C; Exocyst complex component Sec3

  3. XM_040671482.2 → XP_040527416.1  exocyst complex component 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0YRB9
    Conserved Domains (2) summary
    PRK03918
    Location:154 → 256
    PRK03918; DNA double-strand break repair ATPase Rad50
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1

  4. XM_040671478.2 → XP_040527412.1  exocyst complex component 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YJX7
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:184 → 890
    Sec3_C; Exocyst complex component Sec3

  5. XM_040671484.1 → XP_040527418.1  exocyst complex component 1 isoform X7

    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 864
    Sec3_C; Exocyst complex component Sec3

  6. XM_040671481.1 → XP_040527415.1  exocyst complex component 1 isoform X4

    UniProtKB/TrEMBL
    E1BS87
    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 879
    Sec3_C; Exocyst complex component Sec3

  7. XM_040671480.1 → XP_040527414.1  exocyst complex component 1 isoform X3

    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 882
    Sec3_C; Exocyst complex component Sec3

  8. XM_040671477.2 → XP_040527411.1  exocyst complex component 1 isoform X1

    Conserved Domains (2) summary
    cd14683
    Location:3 → 120
    PH-EXOC1; PH-like domain of Exocyst complex component 1
    pfam09763
    Location:191 → 897
    Sec3_C; Exocyst complex component Sec3
Nucleotide Protein Strain
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