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SETD7 SET domain containing lysine methyltransferase 7 [ Gallus gallus (chicken) ]

Gene ID: 422443, updated on 17-Aug-2024

Summary

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Symbol
SETD7provided by CGNC
Full Name
SET domain containing lysine methyltransferase 7provided by CGNC
Primary source
CGNC:7445
See related
Ensembl:ENSGALG00010009114
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See SETD7 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (28913985..28930845, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (28866104..28883098, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124417912 Neighboring gene uncharacterized LOC121110786 Neighboring gene RAB33B, member RAS oncogene family Neighboring gene uncharacterized LOC422442 Neighboring gene microsomal glutathione S-transferase 2 Neighboring gene mastermind like transcriptional coactivator 3 Neighboring gene uncharacterized LOC121110766

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Recruitment of histone modifications by USF proteins at a vertebrate barrier element. West AG, et al. Mol Cell, 2004 Nov 5. PMID 15525517
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K4 monomethyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase SETD7
Names
SET domain-containing protein 7
XP_040527601.1
XP_420409.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    28913985..28930845 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_420409.8 → XP_420409.3  histone-lysine N-methyltransferase SETD7

    UniProtKB/TrEMBL
    A0A8V0Y4K0
    Related
    ENSGALP00010012427.1, ENSGALT00010021744.1
    Conserved Domains (2) summary
    COG2849
    Location:37 → 134
    YwqK; Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms]
    cd10530
    Location:208 → 337
    SET_SETD7; SET domain found in SET domain-containing protein 7 (SETD7) and similar proteins

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    28866104..28883098 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040671667.2 → XP_040527601.1  histone-lysine N-methyltransferase SETD7

    UniProtKB/TrEMBL
    A0A8V0Y4K0
    Conserved Domains (2) summary
    COG2849
    Location:37 → 134
    YwqK; Antitoxin component YwqK of the YwqJK toxin-antitoxin module [Defense mechanisms]
    cd10530
    Location:208 → 337
    SET_SETD7; SET domain found in SET domain-containing protein 7 (SETD7) and similar proteins
Nucleotide Protein
Heading Accession and Version

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