HDAC8 histone deacetylase 8 [Gallus gallus (chicken)] - Gene

Summary

Symbol: HDAC8provided by CGNC
Full Name: histone deacetylase 8provided by CGNC
Primary source: CGNC:3582
Gene type: protein coding
RefSeq status: MODEL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 4

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	4	NC_052535.1 (1836133..1844703)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	4	NC_052576.1 (1872618..1881211)

Chromosome 4 - NC_052535.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables histone deacetylase activity	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: histone deacetylase 8

XP_004940661.1

EC 3.5.1.98

XP_015133869.1

EC 3.5.1.98

XP_040525411.1

EC 3.5.1.98

XP_040525412.1

EC 3.5.1.98

XP_040525413.1

EC 3.5.1.98

XP_040525414.1

EC 3.5.1.98

XP_420178.1

EC 3.5.1.98

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

1836133..1844703

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_004940604.5 → XP_004940661.1 histone deacetylase 8 isoform X1

Conserved Domains (1) summary

cl17011
Location:117 → 395

Arginase_HDAC; Arginase-like and histone-like hydrolases
XM_420178.8 → XP_420178.1 histone deacetylase 8 isoform X2

UniProtKB/TrEMBL

A0A8V0YX55

Conserved Domains (1) summary

cd10000
Location:7 → 368

HDAC8; Histone deacetylase 8 (HDAC8)
XM_015278383.4 → XP_015133869.1 histone deacetylase 8 isoform X3

UniProtKB/TrEMBL

A0A1L1RKH1

Conserved Domains (1) summary

cl17011
Location:7 → 337

Arginase_HDAC; Arginase-like and histone-like hydrolases

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

1872618..1881211

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_040669477.1 → XP_040525411.1 histone deacetylase 8 isoform X1

Conserved Domains (1) summary

cl17011
Location:117 → 395

Arginase_HDAC; Arginase-like and histone-like hydrolases
XM_040669478.2 → XP_040525412.1 histone deacetylase 8 isoform X2

UniProtKB/TrEMBL

A0A8V0YX55

Conserved Domains (1) summary

cd10000
Location:7 → 368

HDAC8; Histone deacetylase 8 (HDAC8)
XM_040669479.2 → XP_040525413.1 histone deacetylase 8 isoform X3

Conserved Domains (1) summary

cl17011
Location:7 → 337

Arginase_HDAC; Arginase-like and histone-like hydrolases
XM_040669480.2 → XP_040525414.1 histone deacetylase 8 isoform X4

Conserved Domains (1) summary

cl17011
Location:7 → 277

Arginase_HDAC; Arginase-like and histone-like hydrolases