U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BRE brain and reproductive organ-expressed (TNFRSF1A modulator) [ Gallus gallus (chicken) ]

Gene ID: 421417, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Symbol
BREprovided by CGNC
Full Name
brain and reproductive organ-expressed (TNFRSF1A modulator)provided by CGNC
Primary source
CGNC:7632
See related
Ensembl:ENSGALG00010021648
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
BABAM2
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (27103698..27268596, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (27029688..27194555, complement)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124418348 Neighboring gene translation initiation factor IF-2-like Neighboring gene FOS like 2, AP-1 transcription factor subunit Neighboring gene uncharacterized LOC107052918 Neighboring gene uncharacterized LOC121110340 Neighboring gene ribokinase Neighboring gene mitochondrial ribosomal protein L33

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Misexpression of BRE gene in the developing chick neural tube affects neurulation and somitogenesis. Wang G, et al. Mol Biol Cell, 2015 Mar 1. PMID 25568339, Free PMC Article
  2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Increased or decreased BRE expression affects somitogenesis, neurogenesis, and NCC migration during early chick embryo development.
    Title: Misexpression of BRE gene in the developing chick neural tube affects neurulation and somitogenesis.
Submit: New GeneRIF Correction

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of BRCA1-A complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of BRISC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
BRISC and BRCA1-A complex member 2
Names
BRCA1-A complex subunit BRE
BRCA1/BRCA2-containing complex subunit 45
BRISC and BRCA1 A complex member 2
brain and reproductive organ-expressed protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008458.2 → NP_001008458.1  BRISC and BRCA1-A complex member 2

    See identical proteins and their annotated locations for NP_001008458.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000063
    UniProtKB/Swiss-Prot
    Q5ZML0
    UniProtKB/TrEMBL
    A0A8V0ZJG8
    Related
    ENSGALP00010031508.1, ENSGALT00010052602.1
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 333
    BRE; Brain and reproductive organ-expressed protein (BRE)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    27103698..27268596 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015283708.4 → XP_015139194.1  BRISC and BRCA1-A complex member 2 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZML0
    UniProtKB/TrEMBL
    A0A8V0ZJG8
    Conserved Domains (1) summary
    pfam06113
    Location:8 → 333
    BRE; Brain and reproductive organ-expressed protein (BRE)

  2. XM_046938812.1 → XP_046794768.1  BRISC and BRCA1-A complex member 2 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZML0
    UniProtKB/TrEMBL
    A0A8V0ZJG8

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    27029688..27194555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046913811.1 → XP_046769767.1  BRISC and BRCA1-A complex member 2 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZML0
    UniProtKB/TrEMBL
    A0A8V0ZJG8

  2. XM_046913812.1 → XP_046769768.1  BRISC and BRCA1-A complex member 2 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZML0
    UniProtKB/TrEMBL
    A0A8V0ZJG8
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZML0.1 GenPept UniProtKB/Swiss-Prot:Q5ZML0

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.