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PRTFDC1 phosphoribosyl transferase domain containing 1 [ Gallus gallus (chicken) ]

Gene ID: 420499, updated on 17-Aug-2024

Summary

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Symbol
PRTFDC1provided by CGNC
Full Name
phosphoribosyl transferase domain containing 1provided by CGNC
Primary source
CGNC:5813
See related
Ensembl:ENSGALG00010005118
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See PRTFDC1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (16659132..16706778)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (16687055..16734437)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene threonine synthase like 1 Neighboring gene enkurin, TRPC channel interacting protein Neighboring gene Rho GTPase activating protein 21 Neighboring gene uncharacterized LOC121109773 Neighboring gene KIAA1217

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hypoxanthine phosphoribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in purine ribonucleoside salvage IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoribosyltransferase domain-containing protein 1
NP_001186514.1
XP_015136863.1
XP_015136864.1
XP_046766944.1
XP_046766945.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001199585.2 → NP_001186514.1  phosphoribosyltransferase domain-containing protein 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000036
    UniProtKB/TrEMBL
    E1C5K1
    Related
    ENSGALP00010006717.1, ENSGALT00010012031.1
    Conserved Domains (1) summary
    cl00309
    Location:16 → 225
    PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    16659132..16706778
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015281378.4 → XP_015136864.1  phosphoribosyltransferase domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XPF7
    Related
    ENSGALP00010006720.1, ENSGALT00010012038.1
    Conserved Domains (1) summary
    cl00309
    Location:16 → 185
    PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain

  2. XM_015281377.4 → XP_015136863.1  phosphoribosyltransferase domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XLN3
    Related
    ENSGALP00010006719.1, ENSGALT00010012035.1
    Conserved Domains (1) summary
    cl00309
    Location:16 → 219
    PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    16687055..16734437
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046910989.1 → XP_046766945.1  phosphoribosyltransferase domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XPF7

  2. XM_046910988.1 → XP_046766944.1  phosphoribosyltransferase domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XLN3
Nucleotide Protein Strain
Heading Accession and Version

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