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ATP6V1C1 ATPase H+ transporting V1 subunit C1 [ Gallus gallus (chicken) ]

Gene ID: 420259, updated on 17-Aug-2024

Summary

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Symbol
ATP6V1C1provided by CGNC
Full Name
ATPase H+ transporting V1 subunit C1provided by CGNC
Primary source
CGNC:51218
See related
Ensembl:ENSGALG00010010906
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ATP6V1C1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (128873605..128895131)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (129080573..129102101)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121109679 Neighboring gene antizyme inhibitor 1 Neighboring gene uncharacterized LOC121113120 Neighboring gene brain and acute leukemia, cytoplasmic Neighboring gene frizzled class receptor 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit C 1
Names
ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    128873605..128895131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_418370.7 → XP_418370.1  V-type proton ATPase subunit C 1

    See identical proteins and their annotated locations for XP_418370.1

    UniProtKB/TrEMBL
    A0A8V0Y6Z6
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  2. XM_025148067.3 → XP_025003835.1  V-type proton ATPase subunit C 1

    UniProtKB/TrEMBL
    A0A8V0Y6Z6
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  3. XM_015282989.4 → XP_015138475.1  V-type proton ATPase subunit C 1

    UniProtKB/TrEMBL
    A0A8V0Y6Z6
    Related
    ENSGALP00010014724.1, ENSGALT00010026093.1
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  4. XM_040696391.2 → XP_040552325.1  V-type proton ATPase subunit C 1

    UniProtKB/TrEMBL
    A0A8V0Y6Z6
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    129080573..129102101
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040663599.2 → XP_040519533.1  V-type proton ATPase subunit C 1

    UniProtKB/TrEMBL
    A0A8V0Y6Z6
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  2. XM_040663601.2 → XP_040519535.1  V-type proton ATPase subunit C 1

    UniProtKB/TrEMBL
    A0A8V0Y6Z6
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  3. XM_040663598.2 → XP_040519532.1  V-type proton ATPase subunit C 1

    UniProtKB/TrEMBL
    A0A8V0Y6Z6
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  4. XM_040663600.2 → XP_040519534.1  V-type proton ATPase subunit C 1

    UniProtKB/TrEMBL
    A0A8V0Y6Z6
    Conserved Domains (2) summary
    cd14785
    Location:56 → 76
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C
Nucleotide Protein Strain
Heading Accession and Version

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