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MYO9B myosin IXB [ Gallus gallus (chicken) ]

Gene ID: 420135, updated on 10-Oct-2024

Summary

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Official Symbol
MYO9Bprovided by CGNC
Official Full Name
myosin IXBprovided by CGNC
Primary source
CGNC:2718
See related
Ensembl:ENSGALG00010027267
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See MYO9B in Genome Data Viewer
Location:
chromosome: 28
Exon count:
45
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 28 NC_052559.1 (4609508..4649951, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 28 NC_052600.1 (4171706..4212149, complement)

Chromosome 28 - NC_052559.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121107760 Neighboring gene insulin receptor Neighboring gene unconventional SNARE in the ER 1 Neighboring gene uncharacterized LOC112530456 Neighboring gene HAUS augmin like complex subunit 8 Neighboring gene C3 and PZP like, alpha-2-macroglobulin domain containing 8 Neighboring gene F2R like thrombin/trypsin receptor 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of a chicken 5 K microarray targeted towards immune function. Smith J, et al. BMC Genomics, 2006 Mar 13. PMID 16533398, Free PMC Article
  2. Expressed sequence tag analysis of Eimeria-stimulated intestinal intraepithelial lymphocytes in chickens. Min W, et al. Mol Biotechnol, 2005 Jun. PMID 15920284
  3. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microfilament motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rho protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in actin filament-based movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
unconventional myosin-IXb

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001286169.2 → NP_001273098.2  unconventional myosin-IXb

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000376
    Conserved Domains (5) summary
    PTZ00121
    Location:989 → 1232
    PTZ00121; MAEBL; Provisional
    smart00109
    Location:1649 → 1697
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    cd04407
    Location:1713 → 1898
    RhoGAP_myosin_IXB; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in myosins IXB. Class IX myosins contain a characteristic head domain, a neck domain and a tail domain which contains a C6H2-zinc binding motif and a Rho-GAP domain. Class ...
    cd01385
    Location:159 → 935
    MYSc_Myo9; class IX myosin, motor domain
    cd17217
    Location:16 → 111
    RA_Myosin-IXb; Ras-associating (RA) domain found in Myosin-IXb

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052559.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4609508..4649951 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040653559.2 → XP_040509493.1  unconventional myosin-IXb isoform X7

    UniProtKB/TrEMBL
    A0A8V1ADP1
    Conserved Domains (5) summary
    PTZ00121
    Location:952 → 1195
    PTZ00121; MAEBL; Provisional
    smart00109
    Location:1612 → 1660
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    cd04407
    Location:1676 → 1861
    RhoGAP_myosin_IXB; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in myosins IXB. Class IX myosins contain a characteristic head domain, a neck domain and a tail domain which contains a C6H2-zinc binding motif and a Rho-GAP domain. Class ...
    cd01385
    Location:159 → 898
    MYSc_Myo9; class IX myosin, motor domain
    cd17217
    Location:16 → 111
    RA_Myosin-IXb; Ras-associating (RA) domain found in Myosin-IXb

  2. XM_015300059.4 → XP_015155545.2  unconventional myosin-IXb isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFP8
    Conserved Domains (5) summary
    PTZ00121
    Location:1019 → 1262
    PTZ00121; MAEBL; Provisional
    smart00109
    Location:1679 → 1727
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    cd04407
    Location:1743 → 1928
    RhoGAP_myosin_IXB; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in myosins IXB. Class IX myosins contain a characteristic head domain, a neck domain and a tail domain which contains a C6H2-zinc binding motif and a Rho-GAP domain. Class ...
    cd01385
    Location:159 → 965
    MYSc_Myo9; class IX myosin, motor domain
    cd17217
    Location:16 → 111
    RA_Myosin-IXb; Ras-associating (RA) domain found in Myosin-IXb

  3. XM_046904588.1 → XP_046760544.1  unconventional myosin-IXb isoform X7

    Related
    ENSGALP00010040381.1, ENSGALT00010066115.1

  4. XM_046904586.1 → XP_046760542.1  unconventional myosin-IXb isoform X5

  5. XM_015300063.4 → XP_015155549.2  unconventional myosin-IXb isoform X3

    UniProtKB/TrEMBL
    A0A8V1ADN5
    Related
    ENSGALP00010040376.1, ENSGALT00010066110.1
    Conserved Domains (5) summary
    PTZ00121
    Location:989 → 1232
    PTZ00121; MAEBL; Provisional
    smart00109
    Location:1649 → 1697
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    cd04407
    Location:1713 → 1898
    RhoGAP_myosin_IXB; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in myosins IXB. Class IX myosins contain a characteristic head domain, a neck domain and a tail domain which contains a C6H2-zinc binding motif and a Rho-GAP domain. Class ...
    cd01385
    Location:159 → 935
    MYSc_Myo9; class IX myosin, motor domain
    cd17217
    Location:16 → 111
    RA_Myosin-IXb; Ras-associating (RA) domain found in Myosin-IXb

  6. XM_046904587.1 → XP_046760543.1  unconventional myosin-IXb isoform X6

  7. XM_046904585.1 → XP_046760541.1  unconventional myosin-IXb isoform X4

    Related
    ENSGALP00010040378.1, ENSGALT00010066112.1

  8. XM_046904584.1 → XP_046760540.1  unconventional myosin-IXb isoform X2

    Related
    ENSGALP00010040375.1, ENSGALT00010066109.1

  9. XM_015300058.4 → XP_015155544.2  unconventional myosin-IXb isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFP8
    Related
    ENSGALP00010040374.1, ENSGALT00010066108.1
    Conserved Domains (5) summary
    PTZ00121
    Location:1019 → 1262
    PTZ00121; MAEBL; Provisional
    smart00109
    Location:1679 → 1727
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    cd04407
    Location:1743 → 1928
    RhoGAP_myosin_IXB; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in myosins IXB. Class IX myosins contain a characteristic head domain, a neck domain and a tail domain which contains a C6H2-zinc binding motif and a Rho-GAP domain. Class ...
    cd01385
    Location:159 → 965
    MYSc_Myo9; class IX myosin, motor domain
    cd17217
    Location:16 → 111
    RA_Myosin-IXb; Ras-associating (RA) domain found in Myosin-IXb

  10. XM_040653553.2 → XP_040509487.1  unconventional myosin-IXb isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFP8
    Conserved Domains (5) summary
    PTZ00121
    Location:1019 → 1262
    PTZ00121; MAEBL; Provisional
    smart00109
    Location:1679 → 1727
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    cd04407
    Location:1743 → 1928
    RhoGAP_myosin_IXB; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in myosins IXB. Class IX myosins contain a characteristic head domain, a neck domain and a tail domain which contains a C6H2-zinc binding motif and a Rho-GAP domain. Class ...
    cd01385
    Location:159 → 965
    MYSc_Myo9; class IX myosin, motor domain
    cd17217
    Location:16 → 111
    RA_Myosin-IXb; Ras-associating (RA) domain found in Myosin-IXb

  11. XM_040653552.2 → XP_040509486.1  unconventional myosin-IXb isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFP8
    Conserved Domains (5) summary
    PTZ00121
    Location:1019 → 1262
    PTZ00121; MAEBL; Provisional
    smart00109
    Location:1679 → 1727
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    cd04407
    Location:1743 → 1928
    RhoGAP_myosin_IXB; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in myosins IXB. Class IX myosins contain a characteristic head domain, a neck domain and a tail domain which contains a C6H2-zinc binding motif and a Rho-GAP domain. Class ...
    cd01385
    Location:159 → 965
    MYSc_Myo9; class IX myosin, motor domain
    cd17217
    Location:16 → 111
    RA_Myosin-IXb; Ras-associating (RA) domain found in Myosin-IXb

  12. XM_015300060.4 → XP_015155546.2  unconventional myosin-IXb isoform X1

    UniProtKB/TrEMBL
    A0A8V1AFP8
    Conserved Domains (5) summary
    PTZ00121
    Location:1019 → 1262
    PTZ00121; MAEBL; Provisional
    smart00109
    Location:1679 → 1727
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    cd04407
    Location:1743 → 1928
    RhoGAP_myosin_IXB; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in myosins IXB. Class IX myosins contain a characteristic head domain, a neck domain and a tail domain which contains a C6H2-zinc binding motif and a Rho-GAP domain. Class ...
    cd01385
    Location:159 → 965
    MYSc_Myo9; class IX myosin, motor domain
    cd17217
    Location:16 → 111
    RA_Myosin-IXb; Ras-associating (RA) domain found in Myosin-IXb

  13. XM_046904583.1 → XP_046760539.1  unconventional myosin-IXb isoform X1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052600.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4171706..4212149 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046933828.1 → XP_046789784.1  unconventional myosin-IXb isoform X7

  2. XM_046933818.1 → XP_046789774.1  unconventional myosin-IXb isoform X1

  3. XM_046933827.1 → XP_046789783.1  unconventional myosin-IXb isoform X7

  4. XM_046933826.1 → XP_046789782.1  unconventional myosin-IXb isoform X5

  5. XM_046933824.1 → XP_046789780.1  unconventional myosin-IXb isoform X3

  6. XM_046933825.1 → XP_046789781.1  unconventional myosin-IXb isoform X4

  7. XM_046933823.1 → XP_046789779.1  unconventional myosin-IXb isoform X2

  8. XM_046933817.1 → XP_046789773.1  unconventional myosin-IXb isoform X1

  9. XM_046933821.1 → XP_046789777.1  unconventional myosin-IXb isoform X1

  10. XM_046933819.1 → XP_046789775.1  unconventional myosin-IXb isoform X1

  11. XM_046933820.1 → XP_046789776.1  unconventional myosin-IXb isoform X1

  12. XM_046933822.1 → XP_046789778.1  unconventional myosin-IXb isoform X1

Nucleotide Protein Strain
Heading Accession and Version

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