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ADAMTS15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 [ Gallus gallus (chicken) ]

Gene ID: 419733, updated on 17-Aug-2024

Summary

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Official Symbol
ADAMTS15provided by CGNC
Official Full Name
ADAM metallopeptidase with thrombospondin type 1 motif, 15provided by CGNC
Primary source
CGNC:965
See related
Ensembl:ENSGALG00010022967
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See ADAMTS15 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 24 NC_052555.1 (1731424..1743164)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 24 NC_052596.1 (1691116..1702860)

Chromosome 24 - NC_052555.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 44 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif, 8 Neighboring gene uncharacterized LOC121107518 Neighboring gene uncharacterized LOC107055048 Neighboring gene sorting nexin 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052555.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1731424..1743164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_417874.8 → XP_417874.2  A disintegrin and metalloproteinase with thrombospondin motifs 15

    UniProtKB/TrEMBL
    E1BX45
    Related
    ENSGALP00010033838.1, ENSGALT00010055899.1
    Conserved Domains (6) summary
    smart00209
    Location:498 → 550
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:197 → 403
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam05986
    Location:662 → 780
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam01562
    Location:24 → 142
    Pep_M12B_propep; Reprolysin family propeptide
    pfam17771
    Location:417 → 484
    ADAM_CR_2; ADAM cysteine-rich domain
    pfam19030
    Location:878 → 931
    TSP1_ADAMTS; Thrombospondin type 1 domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052596.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    1691116..1702860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040690479.2 → XP_040546413.1  A disintegrin and metalloproteinase with thrombospondin motifs 15

    UniProtKB/TrEMBL
    E1BX45
    Conserved Domains (6) summary
    smart00209
    Location:498 → 550
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:197 → 403
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam05986
    Location:662 → 780
    ADAM_spacer1; ADAM-TS Spacer 1
    pfam01562
    Location:24 → 142
    Pep_M12B_propep; Reprolysin family propeptide
    pfam17771
    Location:417 → 484
    ADAM_CR_2; ADAM cysteine-rich domain
    pfam19030
    Location:878 → 931
    TSP1_ADAMTS; Thrombospondin type 1 domain
Nucleotide Protein Strain
Heading Accession and Version

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