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FBXO44 F-box protein 44 [ Gallus gallus (chicken) ]

Gene ID: 419494, updated on 10-Oct-2024

Summary

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Symbol
FBXO44provided by CGNC
Full Name
F-box protein 44provided by CGNC
Primary source
CGNC:51014
See related
Ensembl:ENSGALG00010021213
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
FBXO6
Orthologs
human mouse all
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Genomic context

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See FBXO44 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 21 NC_052552.1 (5655673..5708668, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 21 NC_052593.1 (5689782..5739716, complement)

Chromosome 21 - NC_052552.1Genomic Context describing neighboring genes Neighboring gene chromosome 1 open reading frame 167 Neighboring gene angiotensin II receptor associated protein Neighboring gene dorsal inhibitory axon guidance protein Neighboring gene mitotic arrest deficient 2 like 2 Neighboring gene dispatched RND transporter family member 3 Neighboring gene uncharacterized LOC121107394 Neighboring gene guanylate cyclase activator 2B (uroguanylin)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoprotein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box only protein 6; F-box only protein 44
Names
F-box protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001407787.1 → NP_001394716.1  F-box only protein 6

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000329

  2. NM_001407788.1 → NP_001394717.1  F-box only protein 6

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000329

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052552.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5655673..5708668 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046903296.1 → XP_046759252.1  F-box only protein 44 isoform X2

  2. XM_046903297.1 → XP_046759253.1  F-box only protein 44 isoform X2

  3. XM_015297211.4 → XP_015152697.1  F-box only protein 6 isoform X1

    UniProtKB/TrEMBL
    F1NJI6
    Related
    ENSGALP00010030593.1, ENSGALT00010051402.1
    Conserved Domains (2) summary
    pfam04300
    Location:70 → 248
    FBA; F-box associated region
    pfam12937
    Location:4 → 49
    F-box-like

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052593.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5689782..5739716 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040689271.2 → XP_040545205.2  F-box only protein 44 isoform X3

  2. XM_040689270.2 → XP_040545204.1  F-box only protein 6 isoform X1

    Conserved Domains (2) summary
    pfam04300
    Location:70 → 248
    FBA; F-box associated region
    pfam12937
    Location:4 → 49
    F-box-like
Nucleotide Protein
Heading Accession and Version

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