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MED4 mediator complex subunit 4 [ Gallus gallus (chicken) ]

Gene ID: 418859, updated on 17-Aug-2024

Summary

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Symbol
MED4provided by CGNC
Full Name
mediator complex subunit 4provided by CGNC
Primary source
CGNC:12757
See related
Ensembl:ENSGALG00010003870
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
VDRIP
Orthologs
human mouse all
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Genomic context

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See MED4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (168560704..168569788, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (168650152..168659236, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene succinate-CoA ligase ADP-forming beta subunit Neighboring gene nudix hydrolase 15 Neighboring gene uncharacterized LOC124417626 Neighboring gene integral membrane protein 2B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of core mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 4
Names
vitamin D receptor interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    168560704..168569788 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004938702.5 → XP_004938759.1  mediator of RNA polymerase II transcription subunit 4

    See identical proteins and their annotated locations for XP_004938759.1

    UniProtKB/TrEMBL
    A0A1D5P8W2
    Related
    ENSGALP00010005286.1, ENSGALT00010008954.1
    Conserved Domains (1) summary
    pfam10018
    Location:55 → 180
    Med4; Vitamin-D-receptor interacting Mediator subunit 4

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    168650152..168659236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040662273.2 → XP_040518207.1  mediator of RNA polymerase II transcription subunit 4

    UniProtKB/TrEMBL
    A0A1D5P8W2
    Conserved Domains (1) summary
    pfam10018
    Location:55 → 180
    Med4; Vitamin-D-receptor interacting Mediator subunit 4
Nucleotide Protein Strain
Heading Accession and Version

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