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FGFR1OP2 FGFR1 oncogene partner 2 [ Gallus gallus (chicken) ]

Gene ID: 418214, updated on 10-Oct-2024

Summary

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Symbol
FGFR1OP2provided by CGNC
Full Name
FGFR1 oncogene partner 2provided by CGNC
Primary source
CGNC:10511
See related
Ensembl:ENSGALG00010014748
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See FGFR1OP2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (68065962..68077268)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (68374125..68385406)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene dystroglycan-like Neighboring gene integrator complex subunit 13 Neighboring gene transmembrane 7 superfamily member 3 Neighboring gene mediator complex subunit 21 Neighboring gene uncharacterized LOC121107177 Neighboring gene uncharacterized LOC107054071

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in response to wounding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FGFR1 oncogene partner 2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007855.2 → NP_001007856.1  FGFR1 oncogene partner 2 homolog

    See identical proteins and their annotated locations for NP_001007856.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000012
    UniProtKB/Swiss-Prot
    Q5ZKJ4
    UniProtKB/TrEMBL
    A0A8V0YPQ0
    Related
    ENSGALP00010020627.1, ENSGALT00010035451.1
    Conserved Domains (1) summary
    pfam05769
    Location:4 → 185
    SIKE; SIKE family

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    68065962..68077268
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046939395.1 → XP_046795351.1  FGFR1 oncogene partner 2 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8V0YIA6
    Related
    ENSGALP00010020629.1, ENSGALT00010035456.1

  2. XM_015290277.4 → XP_015145763.1  FGFR1 oncogene partner 2 homolog isoform X2

    Conserved Domains (1) summary
    pfam05769
    Location:24 → 162
    DUF837; Protein of unknown function (DUF837)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    68374125..68385406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZKJ4.1 GenPept UniProtKB/Swiss-Prot:Q5ZKJ4

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials