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FOXN1 forkhead box N1 [ Gallus gallus (chicken) ]

Gene ID: 417570, updated on 17-Aug-2024

Summary

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Symbol
FOXN1provided by CGNC
Full Name
forkhead box N1provided by CGNC
Primary source
CGNC:2668
See related
Ensembl:ENSGALG00010029415
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See FOXN1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (6170318..6199311)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (5906831..5936367)

Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 46 member 1 Neighboring gene solute carrier family 13 member 2 Neighboring gene uncharacterized LOC121107269 Neighboring gene unc-119 lipid binding chaperone Neighboring gene phosphatidylinositol glycan anchor biosynthesis class S Neighboring gene aldolase, fructose-bisphosphate C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein N1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    6170318..6199311
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015296059.4 → XP_015151545.2  forkhead box protein N1 isoform X2

    UniProtKB/TrEMBL
    A0A8V1ANN7
    Related
    ENSGALP00010043849.1, ENSGALT00010071158.1
    Conserved Domains (2) summary
    smart00339
    Location:282 → 366
    FH; FORKHEAD
    COG5025
    Location:274 → 451
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  2. XM_415816.8 → XP_415816.5  forkhead box protein N1 isoform X1

    Conserved Domains (3) summary
    smart00339
    Location:283 → 367
    FH; FORKHEAD
    COG5025
    Location:275 → 452
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    PRK10263
    Location:141 → 284
    PRK10263; DNA translocase FtsK; Provisional

  3. XM_015296058.4 → XP_015151544.2  forkhead box protein N1 isoform X1

    Conserved Domains (3) summary
    smart00339
    Location:283 → 367
    FH; FORKHEAD
    COG5025
    Location:275 → 452
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    PRK10263
    Location:141 → 284
    PRK10263; DNA translocase FtsK; Provisional

  4. XM_046902665.1 → XP_046758621.1  forkhead box protein N1 isoform X2

    UniProtKB/TrEMBL
    A0A8V1ANN7

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5906831..5936367
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040687230.2 → XP_040543164.1  forkhead box protein N1 isoform X2

    Conserved Domains (2) summary
    smart00339
    Location:282 → 366
    FH; FORKHEAD
    COG5025
    Location:274 → 451
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

  2. XM_040687228.2 → XP_040543162.1  forkhead box protein N1 isoform X1

    Conserved Domains (2) summary
    PRK10263
    Location:141 → 284
    PRK10263; DNA translocase FtsK; Provisional
    cd20056
    Location:282 → 378
    FH_FOXN1; Forkhead (FH) domain found in Forkhead box protein N1 (FOXN1)

  3. XM_040687229.2 → XP_040543163.1  forkhead box protein N1 isoform X1

    Conserved Domains (2) summary
    PRK10263
    Location:141 → 284
    PRK10263; DNA translocase FtsK; Provisional
    cd20056
    Location:282 → 378
    FH_FOXN1; Forkhead (FH) domain found in Forkhead box protein N1 (FOXN1)

  4. XM_046930288.1 → XP_046786244.1  forkhead box protein N1 isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
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