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MVB12B multivesicular body subunit 12B [ Gallus gallus (chicken) ]

Gene ID: 417092, updated on 10-Oct-2024

Summary

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Symbol
MVB12Bprovided by CGNC
Full Name
multivesicular body subunit 12Bprovided by CGNC
Primary source
CGNC:629
See related
Ensembl:ENSGALG00010027775
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
FAM125B
Orthologs
human mouse all
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Genomic context

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See MVB12B in Genome Data Viewer
Location:
chromosome: 17
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (10570494..10619734)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (9981089..10030331)

Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121107052 Neighboring gene uncharacterized LOC107052231 Neighboring gene basic proline-rich protein-like Neighboring gene ALC protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of epidermal growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in viral budding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in virus maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
multivesicular body subunit 12B
Names
family with sequence similarity 125, member B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030677.2 → NP_001025848.2  multivesicular body subunit 12B

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000308
    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0, Q5F367
    Related
    ENSGALP00010041190.1, ENSGALT00010067318.1
    Conserved Domains (1) summary
    pfam10240
    Location:17 → 268
    DUF2464; Multivesicular body subunit 12

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    10570494..10619734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046901702.1 → XP_046757658.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0

  2. XM_046901703.1 → XP_046757659.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0

  3. XM_015279391.4 → XP_015134877.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0, Q5F367
    Conserved Domains (1) summary
    pfam10240
    Location:17 → 268
    DUF2464; Multivesicular body subunit 12

  4. XM_040649036.2 → XP_040504970.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0, Q5F367
    Conserved Domains (1) summary
    pfam10240
    Location:17 → 268
    DUF2464; Multivesicular body subunit 12

  5. XM_015279394.4 → XP_015134880.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0, Q5F367
    Conserved Domains (1) summary
    pfam10240
    Location:17 → 268
    DUF2464; Multivesicular body subunit 12

  6. XM_046901700.1 → XP_046757656.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0

  7. XM_040649037.2 → XP_040504971.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0, Q5F367
    Conserved Domains (1) summary
    pfam10240
    Location:17 → 268
    DUF2464; Multivesicular body subunit 12

  8. XM_046901701.1 → XP_046757657.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0

  9. XM_015279392.4 → XP_015134878.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0, Q5F367
    Conserved Domains (1) summary
    pfam10240
    Location:17 → 268
    DUF2464; Multivesicular body subunit 12

  10. XM_015279389.4 → XP_015134875.1  multivesicular body subunit 12B isoform X1

    UniProtKB/TrEMBL
    Q5F367
    Conserved Domains (1) summary
    pfam10240
    Location:42 → 293
    DUF2464; Protein of unknown function (DUF2464)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    9981089..10030331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046928820.1 → XP_046784776.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0

  2. XM_046928822.1 → XP_046784778.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0

  3. XM_046928816.1 → XP_046784772.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0

  4. XM_046928819.1 → XP_046784775.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0

  5. XM_046928814.1 → XP_046784770.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0

  6. XM_046928815.1 → XP_046784771.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0

  7. XM_046928821.1 → XP_046784777.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0

  8. XM_046928817.1 → XP_046784773.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0

  9. XM_046928818.1 → XP_046784774.1  multivesicular body subunit 12B isoform X2

    UniProtKB/TrEMBL
    A0A1D5P5L1, F1P3Y0

  10. XM_046928813.1 → XP_046784769.1  multivesicular body subunit 12B isoform X1

Nucleotide Protein Strain
Heading Accession and Version

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