These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001030672.3 → NP_001025843.1  E3 ubiquitin-protein ligase TRIM41

   See identical proteins and their annotated locations for NP_001025843.1

   Status: VALIDATED

   Source sequence(s)

   JAENSK010000283

   UniProtKB/TrEMBL

   A0A8V0XEG8, Q5EVY2

   Conserved Domains (3) summary

   cd00021
   Location:213 → 250

   BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.

   cd13741
   Location:419 → 589

   SPRY_PRY_TRIM41; PRY/SPRY domain in tripartite motif-binding protein 41 (TRIM41)

   cl17238
   Location:26 → 54

   RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

1. NC_052547.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

   Range

   2140402..2146378

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_015294958.3 → XP_015150444.1  E3 ubiquitin-protein ligase TRIM41 isoform X1

   UniProtKB/TrEMBL

   A0A8V0XEG8

   Related

   ENSGALP00010004028.1, ENSGALT00010006548.1

   Conserved Domains (3) summary

   cd00021
   Location:249 → 286

   BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.

   cd13741
   Location:455 → 625

   SPRY_PRY_TRIM41; PRY/SPRY domain in tripartite motif-binding protein 41 (TRIM41)

   cl17238
   Location:26 → 54

   RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

1. NC_052588.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

   Range

   1041528..1047505

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_046928539.1 → XP_046784495.1  E3 ubiquitin-protein ligase TRIM41 isoform X1