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MGRN1 mahogunin ring finger 1 [ Gallus gallus (chicken) ]

Gene ID: 416660, updated on 10-Oct-2024

Summary

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Symbol
MGRN1provided by CGNC
Full Name
mahogunin ring finger 1provided by CGNC
Primary source
CGNC:5748
See related
Ensembl:ENSGALG00010019640
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See MGRN1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
20
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (12355008..12407281, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (12350563..12402903, complement)

Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene N-alpha-acetyltransferase 60, NatF catalytic subunit Neighboring gene nudix hydrolase 16 like 1 Neighboring gene microRNA 6714 Neighboring gene UBA like domain containing 1 Neighboring gene chromosome 16 open reading frame 96 Neighboring gene cell death-inducing p53 target 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cAMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase MGRN1
XP_004945431.2
XP_004945432.2
XP_015150120.1
XP_015150121.1
XP_040540087.1
XP_040540088.1
XP_040540089.1
XP_040540090.1
XP_040540091.1
XP_046756672.1
XP_046756673.1
XP_046783677.1
XP_046783678.1
XP_414957.5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    12355008..12407281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046900717.1 → XP_046756673.1  E3 ubiquitin-protein ligase MGRN1 isoform X5

  2. XM_046900716.1 → XP_046756672.1  E3 ubiquitin-protein ligase MGRN1 isoform X5

  3. XM_015294634.4 → XP_015150120.1  E3 ubiquitin-protein ligase MGRN1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZAZ2
    Conserved Domains (3) summary
    PHA03307
    Location:334 → 543
    PHA03307; transcriptional regulator ICP4; Provisional
    cd16789
    Location:278 → 318
    mRING-HC-C3HC5_MGRN1_like---blasttree; Modified RING finger, HC subclass (C3HC5-type), found in mahogunin RING finger protein 1 (MGRN1), RING finger protein 157 (RNF157) and similar proteins
    cl29320
    Location:233 → 332
    KilA-N; KilA-N domain

  4. XM_414957.8 → XP_414957.5  E3 ubiquitin-protein ligase MGRN1 isoform X6

    UniProtKB/TrEMBL
    A0A8V0ZAZ2
    Related
    ENSGALP00010028082.1, ENSGALT00010047394.1
    Conserved Domains (2) summary
    cd16789
    Location:278 → 318
    mRING-HC-C3HC5_MGRN1_like---blasttree; Modified RING finger, HC subclass (C3HC5-type), found in mahogunin RING finger protein 1 (MGRN1), RING finger protein 157 (RNF157) and similar proteins
    cl29320
    Location:233 → 332
    KilA-N; KilA-N domain

  5. XM_004945374.5 → XP_004945431.2  E3 ubiquitin-protein ligase MGRN1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z4C8, A0A8V0ZAZ2
    Related
    ENSGALP00010028088.1, ENSGALT00010047403.1
    Conserved Domains (2) summary
    cd16789
    Location:278 → 318
    mRING-HC-C3HC5_MGRN1_like---blasttree; Modified RING finger, HC subclass (C3HC5-type), found in mahogunin RING finger protein 1 (MGRN1), RING finger protein 157 (RNF157) and similar proteins
    cl29320
    Location:233 → 332
    KilA-N; KilA-N domain

  6. XM_004945375.5 → XP_004945432.2  E3 ubiquitin-protein ligase MGRN1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZAZ2
    Conserved Domains (2) summary
    cd16789
    Location:278 → 318
    mRING-HC-C3HC5_MGRN1_like---blasttree; Modified RING finger, HC subclass (C3HC5-type), found in mahogunin RING finger protein 1 (MGRN1), RING finger protein 157 (RNF157) and similar proteins
    cl29320
    Location:233 → 332
    KilA-N; KilA-N domain

  7. XM_015294635.4 → XP_015150121.1  E3 ubiquitin-protein ligase MGRN1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZAZ2
    Conserved Domains (2) summary
    cd16789
    Location:278 → 318
    mRING-HC-C3HC5_MGRN1_like---blasttree; Modified RING finger, HC subclass (C3HC5-type), found in mahogunin RING finger protein 1 (MGRN1), RING finger protein 157 (RNF157) and similar proteins
    cl29320
    Location:233 → 332
    KilA-N; KilA-N domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    12350563..12402903 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046927722.1 → XP_046783678.1  E3 ubiquitin-protein ligase MGRN1 isoform X5

  2. XM_046927721.1 → XP_046783677.1  E3 ubiquitin-protein ligase MGRN1 isoform X5

  3. XM_040684154.2 → XP_040540088.1  E3 ubiquitin-protein ligase MGRN1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZAZ2
    Conserved Domains (3) summary
    PHA03307
    Location:334 → 543
    PHA03307; transcriptional regulator ICP4; Provisional
    cd16789
    Location:278 → 318
    mRING-HC-C3HC5_MGRN1_like---blasttree; Modified RING finger, HC subclass (C3HC5-type), found in mahogunin RING finger protein 1 (MGRN1), RING finger protein 157 (RNF157) and similar proteins
    cl29320
    Location:233 → 332
    KilA-N; KilA-N domain

  4. XM_040684153.2 → XP_040540087.1  E3 ubiquitin-protein ligase MGRN1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z4C8, A0A8V0ZAZ2
    Conserved Domains (2) summary
    cd16789
    Location:278 → 318
    mRING-HC-C3HC5_MGRN1_like---blasttree; Modified RING finger, HC subclass (C3HC5-type), found in mahogunin RING finger protein 1 (MGRN1), RING finger protein 157 (RNF157) and similar proteins
    cl29320
    Location:233 → 332
    KilA-N; KilA-N domain

  5. XM_040684157.2 → XP_040540091.1  E3 ubiquitin-protein ligase MGRN1 isoform X6

    UniProtKB/TrEMBL
    A0A8V0ZAZ2
    Conserved Domains (2) summary
    cd16789
    Location:278 → 318
    mRING-HC-C3HC5_MGRN1_like---blasttree; Modified RING finger, HC subclass (C3HC5-type), found in mahogunin RING finger protein 1 (MGRN1), RING finger protein 157 (RNF157) and similar proteins
    cl29320
    Location:233 → 332
    KilA-N; KilA-N domain

  6. XM_040684155.2 → XP_040540089.1  E3 ubiquitin-protein ligase MGRN1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZAZ2
    Conserved Domains (2) summary
    cd16789
    Location:278 → 318
    mRING-HC-C3HC5_MGRN1_like---blasttree; Modified RING finger, HC subclass (C3HC5-type), found in mahogunin RING finger protein 1 (MGRN1), RING finger protein 157 (RNF157) and similar proteins
    cl29320
    Location:233 → 332
    KilA-N; KilA-N domain

  7. XM_040684156.2 → XP_040540090.1  E3 ubiquitin-protein ligase MGRN1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0ZAZ2
    Conserved Domains (2) summary
    cd16789
    Location:278 → 318
    mRING-HC-C3HC5_MGRN1_like---blasttree; Modified RING finger, HC subclass (C3HC5-type), found in mahogunin RING finger protein 1 (MGRN1), RING finger protein 157 (RNF157) and similar proteins
    cl29320
    Location:233 → 332
    KilA-N; KilA-N domain
Nucleotide Protein Strain
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