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side-IV sidestep IV [ Drosophila melanogaster (fruit fly) ]

Gene ID: 41657, updated on 18-Sep-2024

Summary

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Official Symbol
side-IVprovided by FlyBase
Official Full Name
sidestep IVprovided by FlyBase
Primary source
FLYBASE:FBgn0038156
Locus tag
Dmel_CG14372
See related
AllianceGenome:FB:FBgn0038156
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
14372; BP1073; CG14372; CT34011; Dmel\CG14372
Summary
Is expressed in adult head; hypodermal muscle cell of larval abdomen; and somatic muscle primordium. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See side-IV in Genome Data Viewer
Location:
87E12-87E12; 3-53 cM
Exon count:
17
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (13450590..13464184)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (9276312..9289906)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR42756 Neighboring gene long non-coding RNA:CR45679 Neighboring gene antisense RNA:CR17025 Neighboring gene antisense RNA:CR46354 Neighboring gene long non-coding RNA:CR45914 Neighboring gene mir-252 stem loop

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Searching for guidance cues: follow the Sidestep trail. Aberle H. Fly (Austin), 2009 Oct-Dec. PMID 19786838
  2. Drosophila adult muscle precursor cells contribute to motor axon pathfinding and proper innervation of embryonic muscles. Lavergne G, et al. Development, 2020 Feb 17. PMID 32001438
  3. Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development. Li H, et al. Elife, 2017 Aug 15. PMID 28829740, Free PMC Article
  4. Ig Superfamily Ligand and Receptor Pairs Expressed in Synaptic Partners in Drosophila. Tan L, et al. Cell, 2015 Dec 17. PMID 26687360, Free PMC Article
  5. Genome-wide patterns of local adaptation in Western European Drosophila melanogaster natural populations. Mateo L, et al. Sci Rep, 2018 Nov 1. PMID 30385770, Free PMC Article

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables cell adhesion receptor activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in synapse assembly IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in presynaptic membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
sidestep IV
Names
CG14372-PC
CG14372-PD
side IV
side-IV-PC
side-IV-PD

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    13450590..13464184
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001260157.1 → NP_001247086.1  sidestep IV, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001247086.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VFU7
    Conserved Domains (6) summary
    smart00408
    Location:413 → 478
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:412 → 489
    IG_like; Immunoglobulin like
    pfam00041
    Location:593 → 675
    fn3; Fibronectin type III domain
    pfam07686
    Location:79 → 188
    V-set; Immunoglobulin V-set domain
    pfam13927
    Location:509 → 572
    Ig_3; Immunoglobulin domain
    cl11960
    Location:319 → 392
    Ig; Immunoglobulin domain

  2. NM_001038963.3 → NP_001034052.2  sidestep IV, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001034052.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VFU7
    Conserved Domains (6) summary
    smart00408
    Location:413 → 478
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:412 → 489
    IG_like; Immunoglobulin like
    pfam00041
    Location:593 → 675
    fn3; Fibronectin type III domain
    pfam07686
    Location:79 → 188
    V-set; Immunoglobulin V-set domain
    pfam13927
    Location:509 → 572
    Ig_3; Immunoglobulin domain
    cl11960
    Location:319 → 392
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VFU7 Q9VFU7

Gene LinkOut

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