U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

E4F1 E4F transcription factor 1 [ Gallus gallus (chicken) ]

Gene ID: 416560, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Symbol
E4F1provided by CGNC
Full Name
E4F transcription factor 1provided by CGNC
Primary source
CGNC:4406
See related
Ensembl:ENSGALG00010018095
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See E4F1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (6502475..6509901)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (6498337..6505759)

Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene MTOR associated protein, LST8 homolog Neighboring gene BRICHOS domain containing 5 Neighboring gene phosphoglycolate phosphatase Neighboring gene zinc finger DHHC-type containing 4 Neighboring gene Grid2 interacting protein Neighboring gene solute carrier family 5 member 11

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transcription factor E4F1
Names
p120E4F
XP_015149958.2
XP_015149959.2
XP_040539916.1
XP_040539917.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    6502475..6509901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015294472.4 → XP_015149958.2  transcription factor E4F1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZC00
    Related
    ENSGALP00010026022.1, ENSGALT00010043739.1
    Conserved Domains (4) summary
    PHA00733
    Location:429 → 475
    PHA00733; hypothetical protein
    COG5048
    Location:182 → 306
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:502 → 564
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:185 → 205
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_015294473.4 → XP_015149959.2  transcription factor E4F1 isoform X2

    Conserved Domains (4) summary
    PHA00733
    Location:428 → 474
    PHA00733; hypothetical protein
    COG5048
    Location:182 → 306
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:501 → 563
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:185 → 205
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6498337..6505759
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040683982.2 → XP_040539916.1  transcription factor E4F1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZC00
    Conserved Domains (4) summary
    PHA00733
    Location:429 → 475
    PHA00733; hypothetical protein
    COG5048
    Location:182 → 306
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:502 → 564
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:185 → 205
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_040683983.2 → XP_040539917.1  transcription factor E4F1 isoform X2

    Conserved Domains (4) summary
    PHA00733
    Location:428 → 474
    PHA00733; hypothetical protein
    COG5048
    Location:182 → 306
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:501 → 563
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:185 → 205
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials