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TTC1 tetratricopeptide repeat domain 1 [ Gallus gallus (chicken) ]

Gene ID: 416152, updated on 17-Aug-2024

Summary

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Official Symbol
TTC1provided by CGNC
Official Full Name
tetratricopeptide repeat domain 1provided by CGNC
Primary source
CGNC:983
See related
Ensembl:ENSGALG00010009303
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See TTC1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (7568410..7601518, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (7572765..7605898, complement)

Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene fatty acid binding protein 6 Neighboring gene PWWP domain containing 2A Neighboring gene uncharacterized LOC121111761 Neighboring gene adrenoceptor alpha 1B Neighboring gene uncharacterized LOC124417185

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetratricopeptide repeat protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7568410..7601518 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046900516.1 → XP_046756472.1  tetratricopeptide repeat protein 1

    UniProtKB/TrEMBL
    A0A8V0Y5B1, E1BWM0
    Related
    ENSGALP00010012705.1, ENSGALT00010022147.1

  2. XM_004944815.5 → XP_004944872.1  tetratricopeptide repeat protein 1

    See identical proteins and their annotated locations for XP_004944872.1

    UniProtKB/TrEMBL
    A0A8V0Y5B1, E1BWM0
    Related
    ENSGALP00010012703.1, ENSGALT00010022145.1
    Conserved Domains (4) summary
    smart00028
    Location:193 → 225
    TPR; Tetratricopeptide repeats
    sd00006
    Location:122 → 148
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:159 → 192
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:122 → 190
    TPR_11; TPR repeat

  3. XM_046900517.1 → XP_046756473.1  tetratricopeptide repeat protein 1

    UniProtKB/TrEMBL
    A0A8V0Y5B1, E1BWM0

  4. XM_414484.8 → XP_414484.3  tetratricopeptide repeat protein 1

    See identical proteins and their annotated locations for XP_414484.3

    UniProtKB/TrEMBL
    A0A8V0Y5B1, E1BWM0
    Related
    ENSGALP00010012706.1, ENSGALT00010022148.1
    Conserved Domains (4) summary
    smart00028
    Location:193 → 225
    TPR; Tetratricopeptide repeats
    sd00006
    Location:122 → 148
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:159 → 192
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:122 → 190
    TPR_11; TPR repeat

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7572765..7605898 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046927167.1 → XP_046783123.1  tetratricopeptide repeat protein 1

    UniProtKB/TrEMBL
    A0A8V0Y5B1

  2. XM_040682627.2 → XP_040538561.1  tetratricopeptide repeat protein 1

    UniProtKB/TrEMBL
    A0A8V0Y5B1
    Conserved Domains (2) summary
    TIGR00990
    Location:114 → 258
    3a0801s09; mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)
    sd00006
    Location:122 → 148
    TPR; TPR repeat [structural motif]

  3. XM_046927168.1 → XP_046783124.1  tetratricopeptide repeat protein 1

    UniProtKB/TrEMBL
    A0A8V0Y5B1

  4. XM_040682626.2 → XP_040538560.1  tetratricopeptide repeat protein 1

    UniProtKB/TrEMBL
    A0A8V0Y5B1
    Conserved Domains (2) summary
    TIGR00990
    Location:114 → 258
    3a0801s09; mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)
    sd00006
    Location:122 → 148
    TPR; TPR repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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