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CHDH choline dehydrogenase [ Gallus gallus (chicken) ]

Gene ID: 415993, updated on 5-Mar-2024

Summary

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Symbol
CHDHprovided by CGNC
Full Name
choline dehydrogenaseprovided by CGNC
Primary source
CGNC:3994
See related
Ensembl:ENSGALG00010027863
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See CHDH in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 12 NC_052543.1 (7399483..7412646, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 12 NC_052584.1 (7426426..7439385, complement)

Chromosome 12 - NC_052543.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121106676 Neighboring gene decapping mRNA 1A Neighboring gene calcium voltage-gated channel subunit alpha1 D Neighboring gene selenoprotein K Neighboring gene ARP8 actin-related protein 8 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine betaine biosynthetic process from choline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline dehydrogenase, mitochondrial
XP_025010308.1
XP_040537919.1
XP_040537920.1
XP_414335.5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052543.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7399483..7412646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_414335.7 → XP_414335.5  choline dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8V1AAP8, A0A8V1ADH7
    Related
    ENSGALP00010041266.1, ENSGALT00010067523.1
    Conserved Domains (1) summary
    PRK02106
    Location:159 → 716
    PRK02106; choline dehydrogenase; Validated

  2. XM_025154540.3 → XP_025010308.1  choline dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8V1AAP8, A0A8V1AHX3
    Related
    ENSGALP00010041263.1, ENSGALT00010067520.1
    Conserved Domains (1) summary
    PRK02106
    Location:54 → 611
    PRK02106; choline dehydrogenase; Validated

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052584.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7426426..7439385 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040681985.2 → XP_040537919.1  choline dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8V1AAP8, A0A8V1AHX3
    Conserved Domains (1) summary
    PRK02106
    Location:54 → 611
    PRK02106; choline dehydrogenase; Validated

  2. XM_040681986.2 → XP_040537920.1  choline dehydrogenase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8V1AAP8, A0A8V1AHX3
    Conserved Domains (1) summary
    PRK02106
    Location:54 → 611
    PRK02106; choline dehydrogenase; Validated
Nucleotide Protein Strain
Heading Accession and Version

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