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COX4I1 cytochrome c oxidase subunit 4I1 [ Gallus gallus (chicken) ]

Gene ID: 415826, updated on 17-Aug-2024

Summary

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Symbol
COX4I1provided by CGNC
Full Name
cytochrome c oxidase subunit 4I1provided by CGNC
Primary source
CGNC:4285
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
COX4I2
Orthologs
human mouse all
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Genomic context

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See COX4I1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (17257331..17261423, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (17604867..17608957, complement)

Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene interferon regulatory factor 8 Neighboring gene dual specificity protein phosphatase 22-A-like Neighboring gene ER membrane protein complex subunit 8 Neighboring gene GINS complex subunit 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial electron transport, cytochrome c to oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial respiratory chain complex IV IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome c oxidase subunit 4 isoform 1, mitochondrial
Names
cytochrome c oxidase subunit 4I2
cytochrome c oxidase subunit IV
NP_001025748.1
XP_015148044.1
XP_040563029.1
XP_040563030.1
XP_046781537.1
XP_046781538.1
XP_046781539.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030577.2 → NP_001025748.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial

    See identical proteins and their annotated locations for NP_001025748.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000248
    UniProtKB/TrEMBL
    Q5ZJV5
    Conserved Domains (1) summary
    pfam02936
    Location:38 → 170
    COX4; Cytochrome c oxidase subunit IV

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    17257331..17261423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015292558.3 → XP_015148044.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    Q5ZJV5
    Conserved Domains (1) summary
    pfam02936
    Location:38 → 170
    COX4; Cytochrome c oxidase subunit IV

  2. XM_040707095.2 → XP_040563029.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    Q5ZJV5
    Conserved Domains (1) summary
    pfam02936
    Location:38 → 170
    COX4; Cytochrome c oxidase subunit IV

  3. XM_040707096.2 → XP_040563030.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    Q5ZJV5
    Conserved Domains (1) summary
    pfam02936
    Location:38 → 170
    COX4; Cytochrome c oxidase subunit IV

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    17604867..17608957 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046925581.1 → XP_046781537.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    Q5ZJV5

  2. XM_046925582.1 → XP_046781538.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    Q5ZJV5

  3. XM_046925583.1 → XP_046781539.1  cytochrome c oxidase subunit 4 isoform 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    Q5ZJV5
Nucleotide Protein Strain
Heading Accession and Version

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