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NFATC3 nuclear factor of activated T-cells 3 [ Gallus gallus (chicken) ]

Gene ID: 415711, updated on 17-Aug-2024

Summary

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Symbol
NFATC3provided by CGNC
Full Name
nuclear factor of activated T-cells 3provided by CGNC
Primary source
CGNC:2472
See related
Ensembl:ENSGALG00010021335
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See NFATC3 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (2962185..3023240, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (3304010..3365096, complement)

Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121111710 Neighboring gene epithelial splicing regulatory protein 2 Neighboring gene uncharacterized LOC121111678 Neighboring gene dihydrouridine synthase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcineurin-NFAT signaling cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear factor of activated T-cells, cytoplasmic 3
Names
cytoplasmic nuclear factor of activated T-cells 3
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    2962185..3023240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015292363.4 → XP_015147849.1  nuclear factor of activated T-cells, cytoplasmic 3 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZC35
    Related
    ENSGALP00010030842.1, ENSGALT00010051707.1
    Conserved Domains (2) summary
    cd07881
    Location:419 → 592
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cd01178
    Location:597 → 697
    IPT_NFAT; IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.

  2. XM_015292362.4 → XP_015147848.1  nuclear factor of activated T-cells, cytoplasmic 3 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P8S9
    Related
    ENSGALP00010030839.1, ENSGALT00010051704.1
    Conserved Domains (2) summary
    cd07881
    Location:419 → 592
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cd01178
    Location:597 → 697
    IPT_NFAT; IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.

  3. XM_025154245.3 → XP_025010013.1  nuclear factor of activated T-cells, cytoplasmic 3 isoform X2

    Conserved Domains (2) summary
    cd07881
    Location:405 → 578
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cd01178
    Location:583 → 683
    IPT_NFAT; IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.

  4. XM_046899619.1 → XP_046755575.1  nuclear factor of activated T-cells, cytoplasmic 3 isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    3304010..3365096 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040681013.2 → XP_040536947.1  nuclear factor of activated T-cells, cytoplasmic 3 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZC35
    Conserved Domains (2) summary
    cd07881
    Location:419 → 592
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cd01178
    Location:597 → 697
    IPT_NFAT; IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.

  2. XM_040681011.2 → XP_040536945.1  nuclear factor of activated T-cells, cytoplasmic 3 isoform X1

    UniProtKB/TrEMBL
    A0A1D5P8S9
    Conserved Domains (2) summary
    cd07881
    Location:419 → 592
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cd01178
    Location:597 → 697
    IPT_NFAT; IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.

  3. XM_040681012.2 → XP_040536946.1  nuclear factor of activated T-cells, cytoplasmic 3 isoform X2

    Conserved Domains (2) summary
    cd07881
    Location:405 → 578
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cd01178
    Location:583 → 683
    IPT_NFAT; IPT domain of the NFAT family of transcription factors. NFAT transcription complexes are a target of calcineurin, a calcium dependent phosphatase, and activate genes mainly involved in cell-cell-interaction.

  4. XM_046925766.1 → XP_046781722.1  nuclear factor of activated T-cells, cytoplasmic 3 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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