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RLBP1 retinaldehyde binding protein 1 [ Gallus gallus (chicken) ]

Gene ID: 415492, updated on 17-Aug-2024

Summary

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Symbol
RLBP1provided by CGNC
Full Name
retinaldehyde binding protein 1provided by CGNC
Primary source
CGNC:5041
See related
Ensembl:ENSGALG00010016199
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CRALBP
Orthologs
human mouse all
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Genomic context

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See RLBP1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 10 NC_052541.1 (12989397..12993669)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 10 NC_052582.1 (12867253..12871534)

Chromosome 10 - NC_052541.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon UCG) Neighboring gene DNA polymerase gamma, catalytic subunit Neighboring gene Fanconi anemia complementation group I Neighboring gene abhydrolase domain containing 2 Neighboring gene milk fat globule EGF and factor V/VIII domain containing

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of DES1 as a vitamin A isomerase in Müller glial cells of the retina. Kaylor JJ, et al. Nat Chem Biol, 2013 Jan. PMID 23143414, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol bisphosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinaldehyde-binding protein 1
Names
cellular retinaldehyde-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001024694.2 → NP_001019865.1  retinaldehyde-binding protein 1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000245
    UniProtKB/Swiss-Prot
    E1C1U1
    Related
    ENSGALP00010022490.1, ENSGALT00010038922.1
    Conserved Domains (2) summary
    smart01100
    Location:60 → 116
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    pfam00650
    Location:142 → 291
    CRAL_TRIO; CRAL/TRIO domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052541.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    12989397..12993669
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025153846.3 → XP_025009614.1  retinaldehyde-binding protein 1 isoform X1

    Conserved Domains (2) summary
    smart01100
    Location:65 → 121
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    pfam00650
    Location:147 → 296
    CRAL_TRIO; CRAL/TRIO domain

  2. XM_046899061.1 → XP_046755017.1  retinaldehyde-binding protein 1 isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052582.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    12867253..12871534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046924875.1 → XP_046780831.1  retinaldehyde-binding protein 1 isoform X1

  2. XM_046924876.1 → XP_046780832.1  retinaldehyde-binding protein 1 isoform X2

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
E1C1U1.1 GenPept UniProtKB/Swiss-Prot:E1C1U1

Gene LinkOut

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