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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_213688.2 → NP_998853.1 calpain-7
See identical proteins and their annotated locations for NP_998853.1
Status: PROVISIONAL
- Source sequence(s)
-
BC067919
- UniProtKB/TrEMBL
- A0A6I8RPQ8, Q6NVT4
- Conserved Domains (4) summary
-
- smart00720
Location:646 → 766
- calpain_III; calpain_III domain
- cd00044
Location:170 → 494
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd02680
Location:41 → 113
- MIT_calpain7_2; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This sub-family of MIT domains is found in the nuclear thiol protease PalBH. The molecular function of the MIT domain is unclear.
- cl00299
Location:1 → 32
- MIT; MIT: domain contained within Microtubule Interacting and Trafficking molecules. The MIT domain is found in sorting nexins, the nuclear thiol protease PalBH, the AAA protein spastin and archaebacterial proteins with similar domain architecture, vacuolar ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference UCB_Xtro_10.0 Primary Assembly
Genomic
-
NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly
- Range
-
51575637..51610167 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_012964502.3 → XP_012819956.2 calpain-7 isoform X1
- UniProtKB/TrEMBL
- A0A6I8QT93, A0A6I8RPQ8
- Related
- ENSXETP00000072839.2, ENSXETT00000081025.2
- Conserved Domains (4) summary
-
- smart00720
Location:697 → 817
- calpain_III; calpain_III domain
- cd00044
Location:221 → 545
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd02680
Location:92 → 164
- MIT_calpain7_2; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This sub-family of MIT domains is found in the nuclear thiol protease PalBH. The molecular function of the MIT domain is unclear.
- cl00299
Location:13 → 83
- MIT; domain contained within Microtubule Interacting and Trafficking molecules. The MIT domain is found in sorting nexins, the nuclear thiol protease PalBH, the AAA protein spastin and archaebacterial proteins with similar domain architecture, vacuolar ...
-
XM_031903305.1 → XP_031759165.1 calpain-7 isoform X4
- UniProtKB/TrEMBL
- A0A6I8RPQ8, A0A8J1JQ54
- Conserved Domains (4) summary
-
- smart00720
Location:596 → 716
- calpain_III; calpain_III domain
- cd00044
Location:214 → 538
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd02680
Location:85 → 157
- MIT_calpain7_2; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This sub-family of MIT domains is found in the nuclear thiol protease PalBH. The molecular function of the MIT domain is unclear.
- cl00299
Location:5 → 76
- MIT; domain contained within Microtubule Interacting and Trafficking molecules. The MIT domain is found in sorting nexins, the nuclear thiol protease PalBH, the AAA protein spastin and archaebacterial proteins with similar domain architecture, vacuolar ...
-
XM_012964503.3 → XP_012819957.2 calpain-7 isoform X2
- UniProtKB/TrEMBL
- A0A6I8R8L3, A0A6I8RPQ8
- Related
- ENSXETP00000076986.2, ENSXETT00000093452.2
- Conserved Domains (4) summary
-
- smart00720
Location:690 → 810
- calpain_III; calpain_III domain
- cd00044
Location:214 → 538
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
- cd02680
Location:85 → 157
- MIT_calpain7_2; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This sub-family of MIT domains is found in the nuclear thiol protease PalBH. The molecular function of the MIT domain is unclear.
- cl00299
Location:5 → 76
- MIT; domain contained within Microtubule Interacting and Trafficking molecules. The MIT domain is found in sorting nexins, the nuclear thiol protease PalBH, the AAA protein spastin and archaebacterial proteins with similar domain architecture, vacuolar ...
-
XM_018094608.2 → XP_017950097.2 calpain-7 isoform X3
- UniProtKB/TrEMBL
- A0A6I8RPQ8, A0A8J0SUE6
- Conserved Domains (2) summary
-
- smart00720
Location:537 → 657
- calpain_III; calpain_III domain
- cd00044
Location:61 → 385
- CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.