NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001088518.1 → NP_001081987.1 protein tyrosine phosphatase receptor type F L homeolog precursor
See identical proteins and their annotated locations for NP_001081987.1
Status: PROVISIONAL
- Source sequence(s)
-
AF197945
- UniProtKB/TrEMBL
- A0A974D4B5, Q9IAJ0
- Conserved Domains (6) summary
-
- cd05739
Location:243 → 311
- Ig3_RPTP_IIa_LAR_like; Third immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
- cd00063
Location:316 → 405
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd05738
Location:149 → 223
- Ig2_RPTP_IIa_LAR_like; Second immunoglobulin (Ig)-like domain of the receptor protein tyrosine phosphatase (RPTP)-F, also known as LAR
- cd14629
Location:1494 → 1783
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- pfam07679
Location:30 → 121
- I-set; Immunoglobulin I-set domain
- cl28904
Location:1216 → 1491
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference Xenopus_laevis_v10.1 Primary Assembly
Genomic
-
NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly
- Range
-
83898475..84533076
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_041589192.1 → XP_041445126.1 protein tyrosine phosphatase receptor type F L homeolog isoform X1
- UniProtKB/TrEMBL
- A0A8J1MVS8, A0A974D4B5
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 217
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:36 → 121
- IG_like; Immunoglobulin like
- cd00063
Location:326 → 415
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1630 → 1919
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:47 → 51
- Ig; Ig strand B [structural motif]
- cl28904
Location:1352 → 1627
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589193.1 → XP_041445127.1 protein tyrosine phosphatase receptor type F L homeolog isoform X2
- UniProtKB/TrEMBL
- A0A8J1MTN4, A0A974D4B5
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 217
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:36 → 121
- IG_like; Immunoglobulin like
- cd00063
Location:326 → 415
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1629 → 1918
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:47 → 51
- Ig; Ig strand B [structural motif]
- cl28904
Location:1352 → 1626
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589197.1 → XP_041445131.1 protein tyrosine phosphatase receptor type F L homeolog isoform X6
- UniProtKB/TrEMBL
- A0A8J1MUJ9, A0A974D4B5
- Related
- ENSXLAP00005086870.1, ENSXLAT00005088532.1
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 217
- IGc2; Immunoglobulin C-2 Type
- smart00409
Location:36 → 121
- IG; Immunoglobulin
- cd00063
Location:326 → 415
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1621 → 1910
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:149 → 153
- Ig; Ig strand B [structural motif]
- cl28904
Location:1343 → 1618
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589203.1 → XP_041445137.1 protein tyrosine phosphatase receptor type F L homeolog isoform X14
- UniProtKB/TrEMBL
- A0A8J1MTP5, A0A974D4B5
- Conserved Domains (7) summary
-
- smart00408
Location:147 → 217
- IGc2; Immunoglobulin C-2 Type
- smart00409
Location:245 → 322
- IG; Immunoglobulin
- smart00410
Location:36 → 121
- IG_like; Immunoglobulin like
- cd00063
Location:326 → 415
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1528 → 1817
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:149 → 153
- Ig; Ig strand B [structural motif]
- cl28904
Location:1250 → 1525
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589204.1 → XP_041445138.1 protein tyrosine phosphatase receptor type F L homeolog isoform X15
- UniProtKB/TrEMBL
- A0A8J1MUX0, A0A974D4B5
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 217
- IGc2; Immunoglobulin C-2 Type
- smart00409
Location:36 → 121
- IG; Immunoglobulin
- cd00063
Location:326 → 415
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1519 → 1808
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:149 → 153
- Ig; Ig strand B [structural motif]
- cl28904
Location:1241 → 1516
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589191.1 → XP_041445125.1 protein tyrosine phosphatase receptor type F L homeolog isoform X1
- UniProtKB/TrEMBL
- A0A8J1MVS8, A0A974D4B5
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 217
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:36 → 121
- IG_like; Immunoglobulin like
- cd00063
Location:326 → 415
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1630 → 1919
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:47 → 51
- Ig; Ig strand B [structural motif]
- cl28904
Location:1352 → 1627
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589199.1 → XP_041445133.1 protein tyrosine phosphatase receptor type F L homeolog isoform X8
- UniProtKB/TrEMBL
- A0A8J1MUW4, A0A974D4B5
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 217
- IGc2; Immunoglobulin C-2 Type
- smart00409
Location:36 → 121
- IG; Immunoglobulin
- cd00063
Location:326 → 415
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1619 → 1908
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:149 → 153
- Ig; Ig strand B [structural motif]
- cl28904
Location:1341 → 1616
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589195.1 → XP_041445129.1 protein tyrosine phosphatase receptor type F L homeolog isoform X4
- UniProtKB/TrEMBL
- A0A8J1MTG4, A0A974D4B5
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 217
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:36 → 121
- IG_like; Immunoglobulin like
- cd00063
Location:326 → 415
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1626 → 1915
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:47 → 51
- Ig; Ig strand B [structural motif]
- cl28904
Location:1348 → 1623
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589194.1 → XP_041445128.1 protein tyrosine phosphatase receptor type F L homeolog isoform X3
- UniProtKB/TrEMBL
- A0A8J1MUV9, A0A974D4B5
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 217
- IGc2; Immunoglobulin C-2 Type
- smart00409
Location:36 → 121
- IG; Immunoglobulin
- cd00063
Location:322 → 411
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1626 → 1915
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:149 → 153
- Ig; Ig strand B [structural motif]
- cl28904
Location:1348 → 1623
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589196.1 → XP_041445130.1 protein tyrosine phosphatase receptor type F L homeolog isoform X5
- UniProtKB/TrEMBL
- A0A8J1MVT4, A0A974D4B5
- Related
- ENSXLAP00005086488.1, ENSXLAT00005088151.1
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 211
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:36 → 121
- IG_like; Immunoglobulin like
- cd00063
Location:320 → 409
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1624 → 1913
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:162 → 166
- Ig; Ig strand C [structural motif]
- cl28904
Location:1346 → 1621
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589200.1 → XP_041445134.1 protein tyrosine phosphatase receptor type F L homeolog isoform X9
- UniProtKB/TrEMBL
- A0A8J1MTG9, A0A974D4B5
- Related
- ENSXLAP00005087206.1, ENSXLAT00005088868.1
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 217
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:36 → 121
- IG_like; Immunoglobulin like
- cd00063
Location:326 → 415
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1615 → 1904
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:149 → 153
- Ig; Ig strand B [structural motif]
- cl28904
Location:1337 → 1612
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589202.1 → XP_041445136.1 protein tyrosine phosphatase receptor type F L homeolog isoform X11
- UniProtKB/TrEMBL
- A0A8J1MUK4, A0A974D4B5
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 217
- IGc2; Immunoglobulin C-2 Type
- smart00409
Location:36 → 121
- IG; Immunoglobulin
- cd00063
Location:326 → 415
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1606 → 1895
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:149 → 153
- Ig; Ig strand B [structural motif]
- cl28904
Location:1328 → 1603
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589205.1 → XP_041445139.1 protein tyrosine phosphatase receptor type F L homeolog isoform X16
- UniProtKB/TrEMBL
- A0A8J1MTH6, A0A974D4B5
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 211
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:36 → 121
- IG_like; Immunoglobulin like
- cd00063
Location:316 → 405
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1509 → 1798
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:162 → 166
- Ig; Ig strand C [structural motif]
- cl28904
Location:1231 → 1506
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589206.1 → XP_041445140.1 protein tyrosine phosphatase receptor type F L homeolog isoform X17
- UniProtKB/TrEMBL
- A0A8J1MVU7, A0A974D4B5
- Related
- ENSXLAP00005087377.1, ENSXLAT00005089038.1
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 217
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:36 → 121
- IG_like; Immunoglobulin like
- cd00063
Location:322 → 411
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1520 → 1809
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:149 → 153
- Ig; Ig strand B [structural motif]
- cl28904
Location:1242 → 1517
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589208.1 → XP_041445142.1 protein tyrosine phosphatase receptor type F L homeolog isoform X19
- UniProtKB/TrEMBL
- A0A8J1MTQ2, A0A974D4B5
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 211
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:36 → 121
- IG_like; Immunoglobulin like
- cd00063
Location:320 → 409
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1613 → 1902
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:162 → 166
- Ig; Ig strand C [structural motif]
- cl28904
Location:1335 → 1610
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589198.1 → XP_041445132.1 protein tyrosine phosphatase receptor type F L homeolog isoform X7
- UniProtKB/TrEMBL
- A0A8J1MTN9, A0A974D4B5
- Related
- ENSXLAP00005086693.1, ENSXLAT00005088355.1
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 211
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:36 → 121
- IG_like; Immunoglobulin like
- cd00063
Location:316 → 405
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1620 → 1909
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:162 → 166
- Ig; Ig strand C [structural motif]
- cl28904
Location:1342 → 1617
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589201.1 → XP_041445135.1 protein tyrosine phosphatase receptor type F L homeolog isoform X10
- UniProtKB/TrEMBL
- A0A8J1MVU0, A0A974D4B5
- Related
- ENSXLAP00005087042.1, ENSXLAT00005088705.1
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 211
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:36 → 121
- IG_like; Immunoglobulin like
- cd00063
Location:316 → 405
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1611 → 1900
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:162 → 166
- Ig; Ig strand C [structural motif]
- cl28904
Location:1333 → 1608
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_041589207.1 → XP_041445141.1 protein tyrosine phosphatase receptor type F L homeolog isoform X18
- UniProtKB/TrEMBL
- A0A8J1MUL1, A0A974D4B5
- Conserved Domains (6) summary
-
- smart00408
Location:147 → 211
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:36 → 121
- IG_like; Immunoglobulin like
- cd00063
Location:316 → 405
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- cd14629
Location:1514 → 1803
- R-PTP-F-2; PTP-like domain of receptor-type tyrosine-protein phosphatase F, repeat 2
- cd00096
Location:162 → 166
- Ig; Ig strand C [structural motif]
- cl28904
Location:1236 → 1511
- PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
-
XM_018256537.2 → XP_018112026.1 protein tyrosine phosphatase receptor type F L homeolog isoform X13
- UniProtKB/TrEMBL
- A0A8J0UXT8, A0A974D4B5
- Related
- ENSXLAP00005087591.1, ENSXLAT00005089253.1
-
XM_018256535.2 → XP_018112024.1 protein tyrosine phosphatase receptor type F L homeolog isoform X12
- UniProtKB/TrEMBL
- A0A1L8GM21, A0A974D4B5, A0A974D642
- Related
- ENSXLAP00005086111.1, ENSXLAT00005087772.1