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RPL27 ribosomal protein L27 [ Gallus gallus (chicken) ]

Gene ID: 396280, updated on 17-Aug-2024

Summary

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Official Symbol
RPL27provided by CGNC
Official Full Name
ribosomal protein L27provided by CGNC
Primary source
CGNC:49733
See related
Ensembl:ENSGALG00010022427
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See RPL27 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 27 NC_052558.1 (5097686..5099966)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 27 NC_052599.1 (6259705..6261983)

Chromosome 27 - NC_052558.1Genomic Context describing neighboring genes Neighboring gene prostaglandin E synthase 3 (cytosolic)-like Neighboring gene RUN domain containing 1 Neighboring gene interferon-induced protein 35 Neighboring gene uncharacterized LOC121106446

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Ribosomal protein L27 is identical in chick and rat. Lebeau MC, et al. Nucleic Acids Res, 1991 Mar 25. PMID 1709488, Free PMC Article
  2. Proteomic studies of Syk-interacting proteins using a novel amine-specific isotope tag and GFP nanotrap. Galan JA, et al. J Am Soc Mass Spectrom, 2011 Feb. PMID 21472591, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
large ribosomal subunit protein eL27; 60S ribosomal protein L27
NP_990668.1
XP_040509063.1
XP_046789260.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_205337.1 → NP_990668.1  large ribosomal subunit protein eL27

    See identical proteins and their annotated locations for NP_990668.1

    Status: PROVISIONAL

    Source sequence(s)
    X56852
    UniProtKB/Swiss-Prot
    P61355
    UniProtKB/TrEMBL
    A0A8V0ZHW4
    Related
    ENSGALP00010032922.1, ENSGALT00010054505.1
    Conserved Domains (1) summary
    cl00354
    Location:1 → 136
    KOW; an acronym for the authors' surnames (Kyrpides, Ouzounis and Woese)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052558.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5097686..5099966
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040653129.2 → XP_040509063.1  60S ribosomal protein L27 isoform X1

    Conserved Domains (1) summary
    cd06090
    Location:6 → 168
    KOW_RPL27; KOW motif of eukaryotic Ribosomal Protein L27

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052599.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6259705..6261983
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046933304.1 → XP_046789260.1  60S ribosomal protein L27 isoform X1

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P61355.2 GenPept UniProtKB/Swiss-Prot:P61355

Gene LinkOut

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