U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HNRNPAB heterogeneous nuclear ribonucleoprotein A/B [ Gallus gallus (chicken) ]

Gene ID: 396268, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
HNRNPABprovided by CGNC
Official Full Name
heterogeneous nuclear ribonucleoprotein A/Bprovided by CGNC
Primary source
CGNC:49727
See related
Ensembl:ENSGALG00010015142
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
HNRPAB
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See HNRNPAB in Genome Data Viewer
Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 13 NC_052544.1 (13885275..13913009, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 13 NC_052585.1 (13898356..13926134, complement)

Chromosome 13 - NC_052544.1Genomic Context describing neighboring genes Neighboring gene RasGEF domain family member 1C Neighboring gene collagen type XXIII alpha 1 chain Neighboring gene CDC like kinase 4 Neighboring gene 5-phosphohydroxy-L-lysine phospho-lyase Neighboring gene uncharacterized LOC121106740 Neighboring gene NME/NM23 family member 5 Neighboring gene Wnt family member 8A

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. cDNA encoding a chicken protein (CRP1) with homology to hnRNP type A/B. Cvekl A, et al. Biochim Biophys Acta, 1995 Apr 4. PMID 7711075
  2. Cloning and characterisation of a nuclear, site specific ssDNA binding protein. Smidt MP, et al. Nucleic Acids Res, 1995 Jul 11. PMID 7630716, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
heterogeneous nuclear ribonucleoprotein A/B
Names
chicken ribonucleoprotein, CRP1
ribonucleoprotein
single stranded D box binding factor
single-strand D-box binding factor protein
ssDBF protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001396831.1 → NP_001383760.1  heterogeneous nuclear ribonucleoprotein A/B isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000256
    UniProtKB/TrEMBL
    A0A8V0YRG0, A0A8V0YY39
    Related
    ENSGALP00010021247.1, ENSGALT00010036492.1
    Conserved Domains (3) summary
    pfam08143
    Location:1 → 90
    CBFNT; CBFNT (NUC161) domain
    cd12584
    Location:170 → 249
    RRM2_hnRNPAB; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins
    cd12757
    Location:86 → 165
    RRM1_hnRNPAB; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins

  2. NM_205328.6 → NP_990659.1  heterogeneous nuclear ribonucleoprotein A/B isoform 2

    See identical proteins and their annotated locations for NP_990659.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000256
    UniProtKB/TrEMBL
    A0A8V0YY39, Q90602
    Related
    ENSGALP00010021244.1, ENSGALT00010036489.1
    Conserved Domains (3) summary
    cd12584
    Location:170 → 249
    RRM2_hnRNPAB; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins
    cd12757
    Location:91 → 165
    RRM1_hnRNPAB; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins
    pfam08143
    Location:1 → 90
    CBFNT; CBFNT (NUC161) domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052544.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    13885275..13913009 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015293745.4 → XP_015149231.1  heterogeneous nuclear ribonucleoprotein A/B isoform X1

    UniProtKB/TrEMBL
    A0A8V0YRG0, A0A8V0YY39
    Conserved Domains (3) summary
    pfam08143
    Location:1 → 90
    CBFNT; CBFNT (NUC161) domain
    cd12584
    Location:170 → 249
    RRM2_hnRNPAB; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins
    cd12757
    Location:86 → 165
    RRM1_hnRNPAB; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins

  2. XM_015293752.4 → XP_015149238.1  heterogeneous nuclear ribonucleoprotein A/B isoform X2

    UniProtKB/TrEMBL
    A0A8V0YY39, Q90602
    Conserved Domains (3) summary
    cd12584
    Location:170 → 249
    RRM2_hnRNPAB; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins
    cd12757
    Location:91 → 165
    RRM1_hnRNPAB; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins
    pfam08143
    Location:1 → 90
    CBFNT; CBFNT (NUC161) domain

  3. XM_015293748.4 → XP_015149234.1  heterogeneous nuclear ribonucleoprotein A/B isoform X1

    UniProtKB/TrEMBL
    A0A8V0YRG0, A0A8V0YY39
    Conserved Domains (3) summary
    pfam08143
    Location:1 → 90
    CBFNT; CBFNT (NUC161) domain
    cd12584
    Location:170 → 249
    RRM2_hnRNPAB; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins
    cd12757
    Location:86 → 165
    RRM1_hnRNPAB; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins

  4. XM_015293751.4 → XP_015149237.1  heterogeneous nuclear ribonucleoprotein A/B isoform X2

    UniProtKB/TrEMBL
    A0A8V0YY39, Q90602
    Conserved Domains (3) summary
    cd12584
    Location:170 → 249
    RRM2_hnRNPAB; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins
    cd12757
    Location:91 → 165
    RRM1_hnRNPAB; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein A/B (hnRNP A/B) and similar proteins
    pfam08143
    Location:1 → 90
    CBFNT; CBFNT (NUC161) domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052585.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    13898356..13926134 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046926874.1 → XP_046782830.1  heterogeneous nuclear ribonucleoprotein A/B isoform X1

    UniProtKB/TrEMBL
    A0A8V0YRG0

  2. XM_046926877.1 → XP_046782833.1  heterogeneous nuclear ribonucleoprotein A/B isoform X2

    UniProtKB/TrEMBL
    Q90602

  3. XM_046926875.1 → XP_046782831.1  heterogeneous nuclear ribonucleoprotein A/B isoform X1

    UniProtKB/TrEMBL
    A0A8V0YRG0

  4. XM_046926876.1 → XP_046782832.1  heterogeneous nuclear ribonucleoprotein A/B isoform X2

    UniProtKB/TrEMBL
    Q90602
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.