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FABP7 fatty acid binding protein 7 [ Gallus gallus (chicken) ]

Gene ID: 396246, updated on 17-Aug-2024

Summary

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Symbol
FABP7provided by CGNC
Full Name
fatty acid binding protein 7provided by CGNC
Primary source
CGNC:49717
See related
Ensembl:ENSGALG00010012780
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See FABP7 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (60863627..60867040, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (60773875..60777266, complement)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene clavesin 2 Neighboring gene uncharacterized LOC112532132 Neighboring gene sphingomyelin phosphodiesterase acid like 3A Neighboring gene protein kinase (cAMP-dependent, catalytic) inhibitor beta Neighboring gene serine incorporator 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential expression of AP-2alpha and AP-2beta in the developing chick retina: repression of R-FABP promoter activity by AP-2. Bisgrove DA, et al. Dev Dyn, 1999 Mar. PMID 10090146
  2. Identification and characterization of transcripts present at elevated levels in the undifferentiated chick retina. Godbout R. Exp Eye Res, 1993 Jan. PMID 7916696
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acid-binding protein, brain
Names
B-FABP
R-FABP
brain-type fatty acid-binding protein
cl. 453 fatty acid or lipid binding protein
fatty acid binding protein 7, brain
fatty acid-binding protein, retina

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_205308.3 → NP_990639.1  fatty acid-binding protein, brain

    See identical proteins and their annotated locations for NP_990639.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000063
    UniProtKB/Swiss-Prot
    Q05423
    UniProtKB/TrEMBL
    A0A8V0YIX7
    Related
    ENSGALP00010017763.1, ENSGALT00010030628.1
    Conserved Domains (1) summary
    cd19470
    Location:2 → 131
    FABP7; Fatty acid binding protein 7

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    60863627..60867040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    60773875..60777266 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q05423.2 GenPept UniProtKB/Swiss-Prot:Q05423

Gene LinkOut

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