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SRSF2 serine and arginine rich splicing factor 2 [ Gallus gallus (chicken) ]

Gene ID: 396195, updated on 17-Aug-2024

Summary

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Symbol
SRSF2provided by CGNC
Full Name
serine and arginine rich splicing factor 2provided by CGNC
Primary source
CGNC:20312
See related
Ensembl:ENSGALG00010029370
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
SC-35; SFRS2
Orthologs
human mouse all
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Genomic context

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See SRSF2 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (4866610..4871067)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (4470305..4474762)

Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B Neighboring gene endogenous retrovirus group K member 8 Gag polyprotein-like Neighboring gene uncharacterized LOC124417293 Neighboring gene major facilitator superfamily domain containing 11 Neighboring gene methyltransferase like 23 Neighboring gene arginine demethylase and lysine hydroxylase Neighboring gene matrix remodeling associated 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A potential splicing factor is encoded by the opposite strand of the trans-spliced c-myb exon. Vellard M, et al. Proc Natl Acad Sci U S A, 1992 Apr 1. PMID 1557353, Free PMC Article
  2. Analysis of chicken embryonic gonad expressed sequenced tags. Shin JH, et al. Anim Genet, 2006 Feb. PMID 16441308
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/arginine-rich splicing factor 2
Names
PR 264 protein
Protein PR264
arginine/serine-rich2 splicing factor
splicing component, 35 kDa
splicing factor SC35
splicing factor, arginine/serine-rich 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001305.4 → NP_001001305.1  serine/arginine-rich splicing factor 2

    See identical proteins and their annotated locations for NP_001001305.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000316
    UniProtKB/Swiss-Prot
    P30352
    Related
    ENSGALP00010043722.1, ENSGALT00010071031.1
    Conserved Domains (1) summary
    cd12311
    Location:16 → 88
    RRM_SRSF2_SRSF8; RNA recognition motif (RRM) found in serine/arginine-rich splicing factor SRSF2, SRSF8 and similar proteins

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4866610..4871067
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4470305..4474762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P30352.1 GenPept UniProtKB/Swiss-Prot:P30352

Gene LinkOut

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