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RPS6 ribosomal protein S6 [ Gallus gallus (chicken) ]

Gene ID: 396148, updated on 17-Aug-2024

Summary

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Symbol
RPS6provided by CGNC
Full Name
ribosomal protein S6provided by CGNC
Primary source
CGNC:49670
See related
Ensembl:ENSGALG00010016308
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See RPS6 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (34189975..34194432, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (34189975..34194432, complement)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124417554 Neighboring gene DENN domain containing 4C Neighboring gene alkaline ceramidase 2 Neighboring gene solute carrier family 24 member 2 Neighboring gene uncharacterized LOC107052289

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Use of alternative polyadenylation sites by the chicken S6 ribosomal protein gene. Antione M, et al. Biochem Biophys Res Commun, 1995 May 16. PMID 7755614
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small ribosomal subunit protein eS6
Names
40S ribosomal protein S6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_205225.2 → NP_990556.1  small ribosomal subunit protein eS6

    See identical proteins and their annotated locations for NP_990556.1

    Status: PROVISIONAL

    Source sequence(s)
    X81968
    UniProtKB/Swiss-Prot
    P47838
    UniProtKB/TrEMBL
    Q9PTD6
    Related
    ENSGALP00010022639.1, ENSGALT00010039221.1
    Conserved Domains (1) summary
    cl00931
    Location:1 → 215
    Ribosomal_S6e; Ribosomal protein S6e

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    34189975..34194432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    34189975..34194432 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P47838.1 GenPept UniProtKB/Swiss-Prot:P47838

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials