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CDC42 cell division cycle 42 [ Gallus gallus (chicken) ]

Gene ID: 395917, updated on 17-Aug-2024

Summary

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Symbol
CDC42provided by CGNC
Full Name
cell division cycle 42provided by CGNC
Primary source
CGNC:3561
See related
Ensembl:ENSGALG00010021807
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See CDC42 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 21 NC_052552.1 (6331454..6352716, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 21 NC_052593.1 (6366294..6387553, complement)

Chromosome 21 - NC_052552.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121107399 Neighboring gene Wnt family member 4 Neighboring gene C1orf50 homolog Neighboring gene prolyl 3-hydroxylase 1 Neighboring gene claudin-16-like Neighboring gene claudin 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of genes expressed after noise exposure in the chick basilar papilla. Gong TW, et al. Hear Res, 1996 Jul. PMID 8817303
  2. Complete cDNAs for CDC42 from chicken cochlea and mouse liver. Gong TW, et al. Biochim Biophys Acta, 1997 Jun 26. PMID 9224952
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modification of synaptic structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendritic spine IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cell division control protein 42 homolog
Names
G25K GTP-binding protein
cell division cycle 42 (GTP binding protein, 25kDa)
NP_990379.1
XP_015152312.1
XP_015152313.1
XP_024998252.1
XP_040507034.1
XP_040507035.1
XP_046787102.1
XP_046787103.1
XP_046787104.1
XP_046787105.1
XP_046787106.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_205048.2 → NP_990379.1  cell division control protein 42 homolog

    See identical proteins and their annotated locations for NP_990379.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000329
    UniProtKB/Swiss-Prot
    Q90694
    Conserved Domains (1) summary
    cd01874
    Location:3 → 177
    Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052552.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    6331454..6352716 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040651100.2 → XP_040507034.1  cell division control protein 42 homolog isoform X1

    UniProtKB/Swiss-Prot
    Q90694
    Related
    ENSGALP00010031960.1, ENSGALT00010053066.1
    Conserved Domains (1) summary
    cd01874
    Location:3 → 177
    Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family

  2. XM_015296827.4 → XP_015152313.1  cell division control protein 42 homolog isoform X2

    UniProtKB/TrEMBL
    A0A1D5PD33
    Conserved Domains (1) summary
    cd01874
    Location:3 → 177
    Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family

  3. XM_015296826.4 → XP_015152312.1  cell division control protein 42 homolog isoform X1

    UniProtKB/Swiss-Prot
    Q90694
    Conserved Domains (1) summary
    cd01874
    Location:3 → 177
    Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family

  4. XM_040651101.2 → XP_040507035.1  cell division control protein 42 homolog isoform X2

    UniProtKB/TrEMBL
    A0A1D5PD33
    Related
    ENSGALP00010031956.1, ENSGALT00010053058.1
    Conserved Domains (1) summary
    cd01874
    Location:3 → 177
    Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family

  5. XM_025142484.3 → XP_024998252.1  cell division control protein 42 homolog isoform X2

    UniProtKB/TrEMBL
    A0A1D5PD33
    Conserved Domains (1) summary
    cd01874
    Location:3 → 177
    Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052593.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    6366294..6387553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046931146.1 → XP_046787102.1  cell division control protein 42 homolog isoform X1

    UniProtKB/Swiss-Prot
    Q90694

  2. XM_046931147.1 → XP_046787103.1  cell division control protein 42 homolog isoform X2

    UniProtKB/TrEMBL
    A0A1D5PD33

  3. XM_046931148.1 → XP_046787104.1  cell division control protein 42 homolog isoform X1

    UniProtKB/Swiss-Prot
    Q90694

  4. XM_046931149.1 → XP_046787105.1  cell division control protein 42 homolog isoform X2

    UniProtKB/TrEMBL
    A0A1D5PD33

  5. XM_046931150.1 → XP_046787106.1  cell division control protein 42 homolog isoform X2

    UniProtKB/TrEMBL
    A0A1D5PD33
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q90694.1 GenPept UniProtKB/Swiss-Prot:Q90694

Gene LinkOut

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