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TULP1 tubby like protein 1 [ Gallus gallus (chicken) ]

Gene ID: 395321, updated on 17-Aug-2024

Summary

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Symbol
TULP1provided by CGNC
Full Name
tubby like protein 1provided by CGNC
Primary source
CGNC:49265
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See TULP1 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
13
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 26 NC_052557.1 (105844..113676, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 26 NC_052598.1 (74856..82686, complement)

Chromosome 26 - NC_052557.1Genomic Context describing neighboring genes Neighboring gene sphingomyelin phosphodiesterase 2 Neighboring gene TEA domain transcription factor 3 Neighboring gene FK506 binding protein 5 Neighboring gene colipase Neighboring gene lipoma HMGIC fusion partner-like 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chicken tubby-like protein 1 (TULP1) gene maps to chromosome 26. Zhang HM, et al. Anim Genet, 2004 Apr. PMID 15025594
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubby-related protein 1
Names
tubby-like 1
tubby-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052557.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    105844..113676 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040652794.2 → XP_040508728.1  tubby-related protein 1 isoform X3

  2. XM_040652793.2 → XP_040508727.1  tubby-related protein 1 isoform X1

  3. XM_046904166.1 → XP_046760122.1  tubby-related protein 1 isoform X2

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052598.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    74856..82686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040691262.2 → XP_040547196.1  tubby-related protein 1 isoform X3

  2. XM_040691261.2 → XP_040547195.1  tubby-related protein 1 isoform X1

  3. XM_046933088.1 → XP_046789044.1  tubby-related protein 1 isoform X2

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_204615.1: Suppressed sequence

    Description
    NM_204615.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein Strain
Heading Accession and Version

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