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BID BH3 interacting domain death agonist [ Gallus gallus (chicken) ]

Gene ID: 395236, updated on 10-Oct-2024

Summary

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Symbol
BIDprovided by CGNC
Full Name
BH3 interacting domain death agonistprovided by CGNC
Primary source
CGNC:9863
See related
Ensembl:ENSGALG00010012415
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See BID in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (61900898..61919477, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (62222770..62241275, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting V1 subunit E1 Neighboring gene BCL2 like 13 Neighboring gene uncharacterized LOC121108239 Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 3 Neighboring gene peroxisomal biogenesis factor 26

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of a human Bid homologue protein from Gallus gallus. Díaz-Gil G, et al. Gene, 2006 May 10. PMID 16483731
  2. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. This is the first report demonstrating the functionality of a "BH3-only" protein in chicken.
    Title: Characterization of a human Bid homologue protein from Gallus gallus.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in activation of cysteine-type endopeptidase activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in apoptotic mitochondrial changes IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of extrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of intrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of release of cytochrome c from mitochondria IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BH3-interacting domain death agonist

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_204552.3 → NP_989883.3  BH3-interacting domain death agonist

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000012
    UniProtKB/Swiss-Prot
    Q5ZL87, Q8JGM8
    UniProtKB/TrEMBL
    A0A8V0Y9C7, A0A8V0YHQ1
    Related
    ENSGALP00010017320.1, ENSGALT00010029753.1

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    61900898..61919477 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046900783.1 → XP_046756739.1  BH3-interacting domain death agonist isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y9C7

  2. XM_040705631.2 → XP_040561565.1  BH3-interacting domain death agonist isoform X2

    UniProtKB/Swiss-Prot
    Q5ZL87, Q8JGM8
    UniProtKB/TrEMBL
    A0A8V0Y9C7, A0A8V0YHQ1

  3. XM_015284410.4 → XP_015139896.2  BH3-interacting domain death agonist isoform X1

    UniProtKB/TrEMBL
    A0A8V0YEG7, A0A8V0YFM5
    Related
    ENSGALP00010017316.1, ENSGALT00010029745.1

  4. XM_040705591.1 → XP_040561525.1  BH3-interacting domain death agonist isoform X2

    UniProtKB/Swiss-Prot
    Q5ZL87, Q8JGM8
    UniProtKB/TrEMBL
    A0A8V0Y9C7, A0A8V0YHQ1
    Related
    ENSGALP00010017317.1, ENSGALT00010029748.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    62222770..62241275 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046906513.1 → XP_046762469.1  BH3-interacting domain death agonist isoform X2

  2. XM_046906512.1 → XP_046762468.1  BH3-interacting domain death agonist isoform X2

  3. XM_046906510.1 → XP_046762466.1  BH3-interacting domain death agonist isoform X1

  4. XM_046906511.1 → XP_046762467.1  BH3-interacting domain death agonist isoform X2

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8JGM8.2 GenPept UniProtKB/Swiss-Prot:Q8JGM8

Gene LinkOut

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Molecular Biology Databases
Research Materials