g3bp1.L GTPase activating protein (SH3 domain) binding protein 1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: g3bp1.L
Official Full Name: GTPase activating protein (SH3 domain) binding protein 1 L homeolog
Primary source: Xenbase:XB-GENE-6036991
Locus tag: XELAEV_18016836mg
See related: EnsemblRapid:ENSXLAG00005022604 AllianceGenome:Xenbase:XB-GENE-6036991
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: g3bp; g3bp1; comp65
Summary: Predicted to enable mRNA binding activity. Predicted to be located in cytoplasmic stress granule and cytosol. Predicted to be part of ribonucleoprotein complex. Orthologous to human G3BP1 (G3BP stress granule assembly factor 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 3L

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3L	NC_054375.1 (21953065..21977131)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	3L	NC_030728.1 (9451204..9475318, complement)

Chromosome 3L - NC_054375.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info
enables mRNA binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoplasmic stress granule	IEA Inferred from Electronic Annotation more info
located_in cytosol	IEA Inferred from Electronic Annotation more info
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: GTPase activating protein (SH3 domain) binding protein 1 L homeolog

Names: Ras-GTPase-activating protein SH3-domain-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001087229.1 → NP_001080698.1 GTPase activating protein (SH3 domain) binding protein 1 L homeolog

See identical proteins and their annotated locations for NP_001080698.1

Status: PROVISIONAL

Source sequence(s)

BC045051

UniProtKB/TrEMBL

A0A974DBC8, Q7ZXC7

Related

ENSXLAP00005066487.1, ENSXLAT00005068011.1

Conserved Domains (3) summary

COG0724
Location:272 → 423

RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

cd00780
Location:7 → 135

NTF2; Nuclear transport factor 2 (NTF2) domain plays an important role in the trafficking of macromolecules, ions and small molecules between the cytoplasm and nucleus. This bi-directional transport of macromolecules across the nuclear envelope requires many ...

cd12463
Location:340 → 419

RRM_G3BP1; RNA recognition motif found in ras GTPase-activating protein-binding protein 1 (G3BP1) and similar proteins