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Defensin-like (DEFL) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 3767629, updated on 18-Sep-2024

Summary

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Official Full Name
Defensin-like (DEFL) family protein
Primary source
TAIR:AT1G64195
Locus tag
AT1G64195
See related
Araport:AT1G64195
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Summary
Encodes a defensin-like (DEFL) family protein.
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (23827521..23828048, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Lactoylglutathione lyase / glyoxalase I family protein Neighboring gene 6-phosphogluconate dehydrogenase family protein Neighboring gene ncRNA Neighboring gene vacuolar H+-ATPase subunit E isoform 3 Neighboring gene Leucine-rich repeat protein kinase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of a gene family for PDF-like peptides from Arabidopsis. Omidvar R, et al. Sci Rep, 2021 Sep 23. PMID 34556705, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within defense response to fungus IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within defense response to fungus IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Defensin-like (DEFL) family protein
NP_001031227.2
  • Defensin-like (DEFL) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69825.1); Has 16 Blast hits to 16 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    23827521..23828048 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001036150.3 → NP_001031227.2  Defensin-like (DEFL) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031227.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V4F3, Q9SH70
    UniProtKB/TrEMBL
    A0A5S9WP78
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2V4F3.2

Gene LinkOut

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Molecular Biology Databases
Research Materials