THSD1P1 thrombospondin type 1 domain containing 1 pseudogene 1 [Homo sapiens (human)] - Gene

Summary

Official Symbol: THSD1P1provided by HGNC
Official Full Name: thrombospondin type 1 domain containing 1 pseudogene 1provided by HGNC
Primary source: HGNC:HGNC:31375
See related: AllianceGenome:HGNC:31375
Gene type: pseudo
RefSeq status: INFERRED
Organism: Homo sapiens
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as: THSD1P
Annotation information: Note: This GeneID was annotated on NCBI's build 37.3 as a transcribed pseudogene of THSD1 (GeneID:55901), and was represented by the RefSeq NR_002816.1. However, it has now been determined that much of the NR_002816.1 transcript represents a distinct pseudogene of mitochondrial ribosomal protein S31 (MRPS31, GeneID:10240). GeneID:100887750 has therefore been created to represent the MRPS31P3 pseudogene and NR_002816.1 has been moved to that GeneID, while this record (GeneID:374500) will be retained for the THSD1P1 pseudogene, represented by the RefSeq NG_032770.1. THSD1P1 overlaps the 3' end of MRPS31P3 on the same strand. [17 Jun 2014]
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Genomic context

Location:: 13q14.3

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCh38.p14 (GCF_000001405.40)	13	NC_000013.11 (52167709..52168321, complement)
RS_2024_08	current	T2T-CHM13v2.0 (GCF_009914755.1)	13	NC_060937.1 (51382534..51383146, complement)
RS_2024_09	previous assembly	GRCh37.p13 (GCF_000001405.25)	13	NC_000013.10 (52741844..52742456, complement)

Chromosome 13 - NC_000013.11 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

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General gene information

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Markers

STS-AA035456 (e-PCR)
- UniSTS:29495

A008Q48 (e-PCR)
- UniSTS:47697

DXS8003 (e-PCR)
- UniSTS:99448

RH66294 (e-PCR)
- UniSTS:71589

D13S750 (e-PCR)
- UniSTS:1974

Other Names

THSD1 pseudogene
thrombospondin, type I, domain containing 1 pseudogene 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.