PTGDS prostaglandin D2 synthase 21kDa (brain) [Gallus gallus (chicken)] - Gene

Summary

Official Symbol: PTGDSprovided by CGNC
Official Full Name: prostaglandin D2 synthase 21kDa (brain)provided by CGNC
Primary source: CGNC:49046
See related: Ensembl:ENSGALG00010028450
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as: PDS; PGD2; PGDS; LPGDS; PGDS2; L-PGDS
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Genomic context

Location:: chromosome: 17

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	17	NC_052548.1 (1184872..1186895, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	17	NC_052589.1 (592778..594800, complement)

Chromosome 17 - NC_052548.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

These data indicate a conserved PGD(2) modulation of SOX9 expression during testicular differentiation between birds and mammals.
Title: Male specific expression of lipocalin-type prostaglandin D synthase (cPTGDS) during chicken gonadal differentiation: relationship with cSOX9.

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables small molecule binding	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in extracellular space	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: prostaglandin-H2 D-isomerase

NP_989590.1

EC 5.3.99.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_204259.2 → NP_989590.1 prostaglandin-H2 D-isomerase precursor

See identical proteins and their annotated locations for NP_989590.1

Status: PROVISIONAL

Source sequence(s)

JAENSK010000308

UniProtKB/TrEMBL

A0A8V1A8R1, Q8QFM7

Related

ENSGALP00010042345.1, ENSGALT00010068903.1

Conserved Domains (1) summary

pfam00061
Location:35 → 178

Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

1184872..1186895 complement

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GenBank, FASTA, Sequence Viewer (Graphics)