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lgalslb lectin, galactoside-binding-like b [ Danio rerio (zebrafish) ]

Gene ID: 368889, updated on 2-Nov-2024

Summary

Official Symbol
lgalslbprovided by ZNC
Official Full Name
lectin, galactoside-binding-like bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030616-570
See related
Ensembl:ENSDARG00000055525 AllianceGenome:ZFIN:ZDB-GENE-030616-570
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:zc101n13.9; si:ch211-101n13.9
Summary
Predicted to enable carbohydrate binding activity. Orthologous to human LGALSL (galectin like). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See lgalslb in Genome Data Viewer
Location:
chromosome: 13
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (24552254..24554028)
105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (24421804..24423578)

Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 1 member 4 Neighboring gene SERTA domain containing 2b Neighboring gene uncharacterized LOC110440181 Neighboring gene enoyl CoA hydratase, short chain, 1, mitochondrial

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
lectin, galactoside-binding-like b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007174.1NP_001007175.1  lectin, galactoside-binding-like b

    Status: PROVISIONAL

    Source sequence(s)
    AL772154
    UniProtKB/TrEMBL
    A0A8M1N326, Q7ZZ26
    Related
    ENSDARP00000115476.1, ENSDART00000147907.2
    Conserved Domains (1) summary
    smart00908
    Location:34143
    Gal-bind_lectin; Galactoside-binding lectin

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007124.7 Reference GRCz11 Primary Assembly

    Range
    24552254..24554028
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)